Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq13 194 1e-43
seq204 163 2e-34
seq39944 150 1e-30
seq73720 140 2e-27
seq1540 118 8e-21
seq8949 114 1e-19
seq379 114 1e-19
seq8324 109 4e-18
seq28989 104 2e-16
seq9121 100 2e-15
seq6391 98.7 7e-15
seq113 93.3 3e-13
seq51814 89.7 4e-12
seq12197 87.8 1e-11
seq43983 86.0 5e-11
>seq13
Length=452113
Score = 194 bits (214), Expect = 1e-43
Identities = 692/1062 (65%), Gaps = 40/1062 (4%)
Strand=Plus/Minus
Query 517257 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 517316
|||||| |||||| | ||||| |||||||| | || || ||| || ||||| |
Sbjct 245334 CGGCAGACACATTCAAGATACCGTTGGCATCAATGTCGAAACAGACAGTGATCTGAGGAA 245275
Query 517317 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 517376
| || | ||||||| ||||| || ||| | ||| | || || || || || |
Sbjct 245274 CACCACGGGGAGCAGGCGGGATTCCAGACAACTCGAATTTACCTAGCAAGTTGTTGTCCT 245215
Query 517377 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 517436
| || | || || || || ||| ||||| || | | || || ||||| |
Sbjct 245214 TGGTCCTTGCTCTCTCTCCTTCATAAACCTGGATCAACACACCGGGCTGGTTGTCTGAGT 245155
Query 517437 AAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATA 517492
|||||| || ||| ||| || || || || |||||||| ||||| | |
Sbjct 245154 AAGTTGAGAAAACTTGCTCTTTCTTTGTCGGGATGGTGGTGTTTCTCGGGATCAAGACT- 245096
Query 517493 TTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGG 517552
||||| | ||| || || || || | ||| | ||| || ||||| ||||| | |||
Sbjct 245095 ---GTCATGACACCGCCAGCAGTCTCAAGACCCAAAGAGAGTGGAGTAACATCCAATAGA 245039
Query 517553 ACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGC 517611
| | | || | || |||| | | || ||||| | || ||||||| ||| ||
Sbjct 245038 AGCAAGTCCTGCACCTTCTCATTACCCTCGCCGCTCAAGATT-GCAGCTTGAACAGCCGC 244980
Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671
|||||| |||||||| || || ||||| | | | | || | || || || |||||
Sbjct 244979 ACCATAAGCAACAGCCTCGTCGGGATTGATACTCTTGCAAAGCTCCTTTCCGTTAAAAAA 244920
Query 517672 ATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 517730
| || || || ||| || || ||||| | || || || ||||| | |||| |
Sbjct 244919 GTCCTGCAACAA-TTGCTGAACTTTCGGAATTCTAGTGGAACCACCAACAAGAACAACAT 244861
Query 517731 CATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 517789
|||| || | | | || |||| || | |||| ||| || ||||| || || | |
Sbjct 244860 CATGGACA-GAGCTCTTGTCCATCTTAGCATCCCTCAAACACTTCTCAACTGGCTCCATA 244802
Query 517790 CCCGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847
| | ||| ||||| || || ||| ||||||||| ||| | |||| | ||
Sbjct 244801 CACTTTCTGAACAAATCCATGTTCAA--TTCTTCGAAACGAGCACGGGTAATGGA-ACTG 244745
Query 517848 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAA 517903
|| || |||| ||||| |||| ||||||| ||||| || ||||| ||| || ||
Sbjct 244744 TAGAAATCAACACCTTCATACAATGAATCAATCTCAATTGTGGTTTGTGCAGTGGATGA- 244686
Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGA 517962
|| ||| | | || || | |||||| || || || | ||| | |||| ||| | |
Sbjct 244685 GAGAGTTCTCTTT--GCTCTTTCACAGGCAGTTCTCAATCTCC-TAAGAGCTCTAGGGTT 244629
Query 517963 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 518022
| | | || | || | || ||||| || || | |||| | | || | |
Sbjct 244628 TCCGGTAATGTCCTTCTTGTTCTTCCTCTTAAACTCCTGAACAAAGTGATTAACCATTCT 244569
Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082
|| |||||||||||||||||||| | || | || | ||||| | |||| ||| |
Sbjct 244568 GTTGTCAAAATCTTCACCTCCCAAATGGGTGTCACCAGCTGTAGCCTTGACTTCGAATAT 244509
Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142
|| ||||||| || | ||||| ||||| || || || || | |||||| || |
Sbjct 244508 ACCCTCTTCAATAGTGAGAAGAGAGACATCGAAAGTACCGCCTCCAAGATCAAAGATCAA 244449
Query 518143 TACATTCATTTCT-------TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGC 518193
|||||| | || |||| || || |||||||||||||| |||| ||||||
Sbjct 244448 GACATTCTTCTCACCAACACTTGT---GGCCTTCTTATCAAGACCATAAGCAATAGCAGC 244392
Query 518194 AGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 518253
||| ||||| ||||||||||| | || ||||| || |||||||| || ||||| ||
Sbjct 244391 AGCTGTTGGCTCATTAATAATACGCATGACATTGAGTCCAGCAATGACACCGGCATCCTT 244332
Query 518254 AGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
|| ||||| | || || || || || || ||||| |||||
Sbjct 244331 GGTTGCTTGACGCTGAGAGTCATTGAAGTAAGCAGGGACAGT 244290
>seq204
Length=216821
Score = 163 bits (180), Expect = 2e-34
Identities = 586/901 (65%), Gaps = 29/901 (3%)
Strand=Plus/Minus
Query 517423 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTC 517481
||||||||| ||||| || | || || ||| || ||| || || || |||||||
Sbjct 36947 TTGATTATCCGAATACGTCGAGAAGAC-CTGCTCCTTCTTAGTCGGGATCGTCGTGTTTC 36889
Query 517482 T----ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGA 517537
| ||||| | |||||| | ||||| || || || ||||| | | | ||
Sbjct 36888 TCGGGATCAACAC----GGTCATCACGCCACCAGCCGTCTCCAAACCCAAACTCAACGGC 36833
Query 517538 GTGACATC-AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 517596
|| || || ||| | |||| | ||||| || ||||| | || |||||| ||
Sbjct 36832 GTCACGTCCAACAACAACAAC-TCTTGAACCTTCTCATCTCCCTCGCCCGTAAGAATCGC 36774
Query 517597 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 517656
|| |||| || || ||||| || || || ||||| ||||| | | | | | | |
Sbjct 36773 CGCCTGAACCGCCGCGCCATACGCCACCGCCTCATCGGGATTTATACTCTTACACAACTC 36714
Query 517657 TTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 517715
|| ||||||||||||| ||| |||| |||| | ||| ||||| | | ||| || |
Sbjct 36713 CTTCCCATTGAAAAAATCTTGCAAGA-GTTGCTGAATCTTTGGAATTCTCGTTGACCCAC 36655
Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775
|||| || |||| |||| || || ||||||| |||| |||| || ||| |
Sbjct 36654 CAACCAAAACAACCTCATCAACTTGACTCTTATCCATCTTTGCATCCCTCAAGCATTTCT 36595
Query 517776 CAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 517835
| || || || | || | ||||||||||| | | || || || |||| ||||
Sbjct 36594 CCACCGGCTCCATACACTTCCTAAACAAGTCCATATTCAACTCCTCAAACCTAGCCCTAG 36535
Query 517836 TAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA 517894
|||||| | | || || ||||| || |||||||| || |||| || ||||| || ||
Sbjct 36534 TAAGAG-GCGAGTAAAAGTCAATCCCCTCGAACAACGAGTCAATCTCGATCGTCGTCTGC 36476
Query 517895 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 517954
| || || || | || || |||||||| || ||||| |||| || | |||||| ||
Sbjct 36475 GAGGACGACGACAAAGCTCGCTTAGCACGCTCGCATGCGGTCCGAAGCCGTCGTAACGC- 36417
Query 517955 TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG-- 518012
|| ||| ||| | ||| ||| | ||| || || | |||| |||
Sbjct 36416 -CCGCGCATTCCCGGAAAGATCTTTCTTATGCTTCCTTCTAAACTCCGACACGAAATGGT 36358
Query 518013 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 518072
| || | ||||| || ||||| || ||||| | | |||| || | ||| || | |
Sbjct 36357 TCACCATTCGATTGTCGAAATCCTCGCCTCCAAGATGCGTATCGCCCGCCGTCGCCTTAA 36298
Query 518073 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132
| | ||| | ||| ||||| | || || | || || || || || || || | |
Sbjct 36297 CCTCGAAGATTCCTTCTTCGATAGTTAAGATAGACACGTCGAAAGTGCCGCCCCCGAGGT 36238
Query 518133 CAAAAATAAGTACATT-CATT---TCTTTGTCTTGG-----TTTTTATCAAGACCATACG 518183
| || ||||| || || | | | ||||| || || || || ||||||||||
Sbjct 36237 CGAATATAAGGACGTTACGCTCCCCCGTTGTCCGGGCGGCCTTCTTGTCGAGACCATACG 36178
Query 518184 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 518243
||| || || || || || || ||||| || | | || || || ||||||| |
Sbjct 36177 CAATGGCGGCGGCCGTCGGCTCGTTAATGATCCGGATGACGTTGAGGGCAGCAATCGAGC 36118
Query 518244 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 518303
| || ||||| |||||||| | ||| || ||||| || || || || || || | ||||
Sbjct 36117 CGGCGTCTTTGGTGGCTTGGCGTTGGGAGTCGTTGAAGTAGGCGGGGACGGTTACGACGG 36058
Query 518304 C 518304
|
Sbjct 36057 C 36057
>seq39944
Length=4033
Score = 150 bits (166), Expect = 1e-30
Identities = 326/478 (68%), Gaps = 10/478 (2%)
Strand=Plus/Plus
Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324
||||| ||||| || ||||| || | || || ||| ||||| || || || |
Sbjct 778 ACATTGAGAATGCCGTTGGCGTCAATGTCGAAGCAGACCGTGATTTGCGGAACGCCCCGA 837
Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384
|||| |||||||| || | | || | ||||| ||||| ||||| || |
Sbjct 838 GGAGCTGGTGGGATTCCAGAGAGCTCGAACTTGCCCAGTAAGTTATTGTCTTTTGTTCTT 897
Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444
||||||||| || ||| |||||| || ||| || ||||| || |||||||
Sbjct 898 GCTCGTTCACCTTCATAAACTTGGATTAGCACACCAGGCTGGTTATCGGAGTAAGTTGAG 957
Query 517445 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503
||||| ||| ||| || ||||| || || |||||||| ||| | ||||||| |
Sbjct 958 AATAC-CTGCTCTTTCTTGCAAGGGATAGTAGTGTTTCTCGGAATCAAGGTGGTCATTAC 1016
Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563
||||| || || || ||||| || || ||||||||||| || | | | || || ||
Sbjct 1017 TCCACCCGCCGTCTCCAAACCGAGCGATAGAGGAGTGACGTCCAGCAACAGAAGATCCTG 1076
Query 517564 AAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622
|| || | || | | ||| |||| ||||| || || | |||||||||||||| |
Sbjct 1077 AACCTTCTGATTACCCTCGCCACTCAAG-ATAGCAGCCTGGACTGCAGCACCATATGCTA 1135
Query 517623 CAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAA 517679
|||||||||| || || | | || || || | ||| |||||||| || | ||| ||
Sbjct 1136 CAGCTTCATCCGGGTTGATGCTCTTGCA--TAACTCTTTCCCATTGAAGAAGTCTTGCAA 1193
Query 517680 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737
||| ||| || || ||||| || | ||| || ||||| || ||||| ||||| ||
Sbjct 1194 -AAGCTGTTGAACTTTTGGAATCCGGGTTGAGCCACCAACCAACACAATATCATGGAC 1250
>seq73720
Length=1174
Score = 140 bits (154), Expect = 2e-27
Identities = 284/417 (68%), Gaps = 11/417 (3%)
Strand=Plus/Plus
Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT-----CTTGGTTT-TTA 518170
|||||||| |||| |||||| || | |||||| | || | |||| || ||
Sbjct 55 GTTCCACCGCCCAAATCAAAGATCAACACATTCTTCTCCCCGGTACTGCTTGCCTTCTTG 114
Query 518171 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 518230
|||||||| || |||| ||||||||||||||||||||||| ||||||| ||||| |
Sbjct 115 TCAAGACCGTATGCAATGGCAGCAGCAGTTGGTTCATTAATGATTCTCATGACATTCATT 174
Query 518231 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 518290
|||| |||| || ||||| || ||||| |||| || || || || ||||| |||||
Sbjct 175 CCAGAAATTACCCCAGCATCCTTGGTGGCCTGTCGCTGAGAGTCATTGAAATAAGCAGGG 234
Query 518291 ACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATT 518350
|| |||| ||| |||| | ||| | |||||| | |||| ||| ||| |||||
Sbjct 235 ACTGTAACAACAGCATTCTTCACTGTTGTACCAAGAAAAGCCTCTGCAATTTCCTTCATC 294
Query 518351 TTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATA 518409
|| | | | ||| |||||||| | ||| | | ||||||| || |||| |
Sbjct 295 TTGGTGAGTACCATGGATGAAATCTCTTCAGCGCTGAATTGCTTCTCCTCGCCCTTGA-A 353
Query 518410 TGATACTTCAAAATATGGTTTATTACC---AACATTAATAACTTTAAATGGCCAGTATTT 518466
|| || ||| || || | ||| | || ||| |||||||||||||| | |||
Sbjct 354 TGTCACAACAATCATCGGCTTGTCACCGGGACCAGGAATCACTTTAAATGGCCAATGTTT 413
Query 518467 CATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523
||| || || || | ||| |||| || ||||| |||| ||||||||
Sbjct 414 CATGTCACTCTGTACCGACGGATCACTAAACCTCCTTCCAATCAATCTCTTTGCATC 470
>seq1540
Length=57101
Score = 118 bits (130), Expect = 8e-21
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| | || ||||| ||||| |||||||||||||||||| ||||| || || |||
Sbjct 19086 CCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCTGCA 19145
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||||| || || || || || ||||| ||||||| ||| || || ||||| |||||||||
Sbjct 19146 ATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACAGTA 19205
Query 518297 ATAACGGC 518304
|| |||||
Sbjct 19206 ATGACGGC 19213
Score = 93.3 bits (102), Expect = 3e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300
|| || || | ||| || |||||||| ||||||||||| ||| | ||||||| | ||
Sbjct 19083 AATCCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCT 19142
Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360
|||||| | | | || |||||||| || ||||| ||||| || |||||||| |||
Sbjct 19143 GCAATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACA 19202
Query 322361 GTAATAACTGCTTT 322374
||||| || |||||
Sbjct 19203 GTAATGACGGCTTT 19216
>seq8949
Length=22983
Score = 114 bits (126), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT--TTG 518158
||||| ||||| || ||||| || | |||||| || || || ||| | ||| |
Sbjct 20350 AAGAGAGACATCGAATGTACCACCTCCAAGATCAAAGATCAGCACGTTCTTCTCTCCTAC 20409
Query 518159 TCTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214
|||| ||||| ||||| ||||| |||| ||| ||||| || |||||||| || ||
Sbjct 20410 ACTTGTGGCTTTTTTGTCAAGCCCATAAGCAATAGCGGCAGCTGTGGGTTCATTGATGAT 20469
Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274
| || ||||||||||||||||| || |||||||| || ||||| | ||| || ||
Sbjct 20470 ACGCATGACATTAAGACCAGCAATGACACCAGCATCTTTGGTAGCTTGACGTTGGGAGTC 20529
Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGC 518304
||||| || ||||| || || | ||| ||
Sbjct 20530 ATTAAAGTACGCAGGTACTGTGACAACTGC 20559
>seq379
Length=267923
Score = 114 bits (126), Expect = 1e-19
Identities = 163/227 (72%), Gaps = 7/227 (3%)
Strand=Plus/Minus
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| ||||||| || | ||||| ||||| || ||||| || | |||||| ||||
Sbjct 221893 CCCTCTTCAATAGTGAGAAGAGACGCATCAAATGTACCACC-CCAAGATCAAAGTTAAGC 221835
Query 518144 ACATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197
|||||| | ||| | |||| | || ||||||||||| |||| ||||||||||
Sbjct 221834 ACATTCTTCTCTCCAACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATAGCAGCAGCA 221775
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
|| || || || || || | || |||||| ||||||||||| || ||||||| |||
Sbjct 221774 GTAGGCTCGTTGATGATACGCATAACATTTAGACCAGCAATGACACCACCATCTTTGGTG 221715
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
|| || | | || || |||||||||||||| || || | ||| ||
Sbjct 221714 GCCTGACGCAGAGAGTCATTAAAATATGCAGGGACGGTGACAACAGC 221668
>seq8324
Length=70553
Score = 109 bits (120), Expect = 4e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| | || ||||||||||| ||||||||||| ||||| ||||| ||| || |||
Sbjct 29904 CCATAAGAAAGTGCAGCAGCAGTGGGTTCATTAATGATTCTTTGAACATCAAGTCCGGCA 29963
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
|||||||| ||||| || || ||||| || || | ||| || || || || || |||||
Sbjct 29964 ATTCTTCCAGCATCCTTTGTTGCTTGCCTCTGAGCATCATTGAAGTAAGCCGGGACAGTG 30023
Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356
| || || | | || |||||||| ||||| || |||| ||||||||| |
Sbjct 30024 ACCACAGCTTTTGAAACAGTTTTACCAAGGTAAGCCTCAGCAGTTTCCTTCATTTTAGTC 30083
Query 518357 AAAATCATTGATGAAATTTG 518376
|| | | || | ||||||
Sbjct 30084 AACACAAATGCTCCAATTTG 30103
>seq28989
Length=22622
Score = 104 bits (114), Expect = 2e-16
Identities = 241/362 (67%), Gaps = 6/362 (2%)
Strand=Plus/Minus
Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083
||||| ||||| || ||||| | | ||| | || | | || | || | |||||
Sbjct 2478 TTATCGAAATCCTCCCCTCCAAGATGAGTGTCACCGGTTATTGCCTTGACCTCGAAAATA 2419
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| ||||| | | | | || ||||| |||| |||| || |||||| || |
Sbjct 2418 CCCTCTTCGATTGTAAGCAAAGAAACATCGAACGTTCGGCCACTCAAATCAAAGATCATC 2359
Query 518144 ACATTCATTTCTTTG-----TCTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCA 518197
|||||| |||| || ||| | || || |||||||| || ||| |||| | ||
Sbjct 2358 ACATTCTTTTCACTGGTATTTCTCGCCTTCTTGTCAAGACCGTATGCATTGGCAGGAACA 2299
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
||||||||||||| ||||||| ||||| | ||| | |||| | |||| || |||
Sbjct 2298 TTTGGTTCATTAATTATTCTCATGACATTCATACCCGAAATTACCCTAACATCCTTGGTG 2239
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317
|| |||| || || || || ||||||| ||| || |||| ||| ||| | ||| |
Sbjct 2238 GCCTGTCGCTGAGAGTCATTGAAATATGTAGGGACTGTAACAACAACATTCTTCACTGTT 2179
Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377
|||||| | |||| ||| ||| | |||| || | | | ||| ||||| || | |
Sbjct 2178 GTACCAAGAAAAGCCTCTGCAATTTCTGTCATCTTGGTGAGTACCATGGATGATATCTCT 2119
Query 518378 TC 518379
||
Sbjct 2118 TC 2117
>seq9121
Length=22643
Score = 100 bits (110), Expect = 2e-15
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || |||||||| || |||| ||||| || ||||||||||||| ||||||| |||
Sbjct 7741 TTCTTGTCAAGACCGTATGCAATGACAGCAACATTTGGTTCATTAATTATTCTCATGACA 7800
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| | ||| | |||| | ||||| || ||| | |||| ||| || || || ||||||
Sbjct 7801 TTTATACCCGAAATTACCCTAGCATCCTTGGTGCCCTGTCGTTGAGAGTCATTGAAATAT 7860
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344
||||| | |||| ||| ||| | ||| | |||||| | |||| ||| |||
Sbjct 7861 GCAGGGAATGTAACAACAACATTCTTCACTATTGTACCAAGAAAAGCCTCTGCAATTTCC 7920
Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTC 518379
|||| || | | | ||| ||||| || | |||
Sbjct 7921 GTCATCTTGGTGAGTACCATGGATGATATCTCTTC 7955
>seq6391
Length=28792
Score = 98.7 bits (108), Expect = 7e-15
Identities = 196/289 (68%), Gaps = 6/289 (2%)
Strand=Plus/Plus
Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083
|| || |||||||| ||||| | | || | ||| | || || | |||| ||||
Sbjct 15696 TTGTCGAAATCTTCTCCTCCTAGATGGGTGTCTCCAGCAGTGGCCTTCACTTCAAAAATA 15755
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| ||||||| | | || | || ||| || ||||| || | |||||| || |
Sbjct 15756 CCCTCTTCAATCGTGAGGAGGGACACGTCAAAAGTGCCACCTCCAAGATCAAAGATCAAC 15815
Query 518144 ACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197
|||||| | ||| | ||| || || || ||||| || |||| ||||||||
Sbjct 15816 ACATTCTTCTCTCCAACACTGGTGGCCTTCTTGTCGAGACCGTAAGCAATGGCAGCAGCT 15875
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
|| || ||||| || || | || || ||||| ||||| || || ||||| || |||
Sbjct 15876 GTAGGCTCATTGATGATGCGCATGACGTTAAGTCCAGCTATGACACCAGCATCCTTGGTG 15935
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306
|||||||| || || ||||| || |||||||| || || | || ||||
Sbjct 15936 GCTTGTCTCTGAGAGTCGTTGAAGTATGCAGGGACCGTCACCACTGCAT 15984
>seq113
Length=168429
Score = 93.3 bits (102), Expect = 3e-13
Identities = 139/197 (71%), Gaps = 3/197 (2%)
Strand=Plus/Plus
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| | | | |||||| || |||||||| | ||||| | || | |||
Sbjct 42003 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACCAGGATGTTC 42062
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
| || | ||| || || || | ||||| |||| ||| || |||||||||||||||
Sbjct 42063 TTCTC---GCCTTTCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCAGTTGGTTCATTA 42119
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|||||||| |||||| | ||||| ||| ||| || ||||| || || ||||| ||
Sbjct 42120 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCGTCTTTTGTAGCCTGTCTCTGG 42179
Query 518270 GAATCGTTAAAATATGC 518286
| ||| || || || ||
Sbjct 42180 GCATCATTGAAGTAGGC 42196
Score = 93.3 bits (102), Expect = 3e-13
Identities = 139/197 (71%), Gaps = 3/197 (2%)
Strand=Plus/Minus
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| | | | |||||| || |||||||| | ||||| | ||| | |||
Sbjct 64665 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACAAGGATGTTC 64606
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
| || | || || || || | ||||| |||| ||| || || ||||||||||||
Sbjct 64605 TTCTC---GCCTCCCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCGGTTGGTTCATTA 64549
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|||||||| |||||| | ||||| ||| ||| |||||||| || || ||||| ||
Sbjct 64548 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCATCTTTTGTAGCCTGTCTCTGG 64489
Query 518270 GAATCGTTAAAATATGC 518286
| ||| || || || ||
Sbjct 64488 GCATCATTGAAGTAGGC 64472
>seq51814
Length=2102
Score = 89.7 bits (98), Expect = 4e-12
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573
||||||||||||||||| || ||||||||||| | || | || | || | || |||
Sbjct 648 GTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTGGACCTTCTCA 707
Query 517574 TCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 517632
| | | || | ||||| |||| ||||| | |||||||||||| |||||| | |||||
Sbjct 708 TTACCCTCACTACTCAAGA-TAGCAGCTTGGACAGCAGCACCATAAGCAACAACCTCATC 766
Query 517633 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 517683
|||||| | | | | || | || ||||| ||||||| | ||||||
Sbjct 767 AGGATTGATGCTCTTGCTGAGCTCCTTGCCATTAAAAAAATCCGTAAGAAG 817
>seq12197
Length=17840
Score = 87.8 bits (96), Expect = 1e-11
Identities = 119/161 (74%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 517387 TCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 517445
||||||||| || ||| |||||| |||| | ||| || ||||| || ||||||| |
Sbjct 17628 TCGTTCACCTTCATAAACTTGGATGAGTA-CACCAGGCTGGTTATCAGAGTAAGTTGAGA 17686
Query 517446 ATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504
|||| ||| ||| || ||||| || || |||||||| ||| | ||||||| |
Sbjct 17687 ATAC-CTGCTCTTTCTTGCAAGGGATGGTAGTGTTTCTCGGAATCAAGGTGGTCATCACT 17745
Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545
||||| || || || ||||| || || ||||||||||| ||
Sbjct 17746 CCACCAGCCGTCTCCAAACCGAGTGATAGAGGAGTGACGTC 17786
>seq43983
Length=3554
Score = 86.0 bits (94), Expect = 5e-11
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573
||||||||||||||||| || ||||||||||| | || | || | || | || |||
Sbjct 2116 GTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTGGACCTTCTCA 2175
Query 517574 TCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 517632
| | | |||| ||||| |||| |||| | |||||||||||| |||| | | |||||
Sbjct 2176 TTACCCTCACCACTCAAGA-TAGCAACTTGGACAGCAGCACCATAAGCAAAAACCTCATC 2234
Query 517633 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 517683
|||||| | | | | || | || ||||| ||||||| | ||||||
Sbjct 2235 AGGATTGATGCTCTTGCTGAGCTCCTTGCCATTTAAAAAATCCGTAAGAAG 2285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3761588708985364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |