Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4197 109 6e-19 seq270 86.0 7e-12 >seq4197 Length=36674 Score = 109 bits (120), Expect = 6e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| || || ||||| | ||| || |||| ||||||||||| ||||||| || Sbjct 23441 CCTTCGTCGCGGGAGATCAACTCGTTCGAGAAGGTTAGTCCAGGCATCAGTCCTCGCTTT 23500 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 ||||||||||| || || || || |||||||| |||||||| || || || ||||| ||| Sbjct 23501 TTTAGCCAAAATATCGCGCAGAAGCTTCCAGAGAAGAAGATACCTTCAACGCAGGCAAAA 23560 Query 119634 GCGAATAGACGCTCAGCAAA 119653 || | || |||||||| || Sbjct 23561 GCAACTATGCGCTCAGCGAA 23580 >seq270 Length=105985 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| || | || || ||||| || |||| | ||| ||||| || || | ||| Sbjct 91813 CCTTCGTCTCTGGATATAAGCTCGTTGGAGAAGGTCAATCCTGGCATCAGACCGCGTTTT 91872 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 |||||||| || | ||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct 91873 TTTAGCCAGAATACGGCGCAGAAGCTTCCGGAGAAGAAGATGCCTTCCACGCAAGCGAAA 91932 Query 119634 GCGAATAGACGCTCAGCAAA 119653 |||| | ||||| || || Sbjct 91933 GCGACGATTCGCTCGGCGAA 91952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586122455453200