Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 327 1e-84
seq8546 232 8e-56
seq25216 143 3e-29
seq59 143 3e-29
seq3927 109 6e-19
seq8630 105 8e-18
seq4835 87.8 2e-12
>seq5412
Length=31808
Score = 327 bits (362), Expect = 1e-84
Identities = 489/692 (71%), Gaps = 8/692 (1%)
Strand=Plus/Minus
Query 167909 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCC 167967
|||| ||||| |||||||||| || | ||| | ||||| ||| || || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 167968 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 168027
||| | |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 168028 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTT 168087
| || || ||||| || ||||||||||| || | | ||| | |||||| || |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 168088 CACTTCTATCCCATCTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCT 168147
||||| ||||| || |||||||| ||||| | ||||| ||||| || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 168148 TTCCAACTAGTAGTCTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGG 168207
| | ||| | || ||||||||| | | ||| | | |||||||| ||||| |||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 168208 GAACTTTCATATCGTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTC 168267
|||||| | ||| | |||||||| || ||||| |||||| || || || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 168268 GCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCA 168327
|| | || | ||| || ||| | | || || | ||| |||| || || ||| |||
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 168328 ATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAAT 168387
||||| || ||||| || || || ||||||| |||| | || ||||| |||||||||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 168388 ATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTT 168447
|| || ||||| || || || ||| | ||||| ||||| ||||| | ||| | ||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 168448 AGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAA 168507
|| ||| || |||||| || || | | | || || || || |||| |||
Sbjct 14744 AG------GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 168508 TCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCT 168567
|| || | ||||||| | | || ||||| ||||| || || || |||||||| |||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 168568 CATGGTTACTTCGGTCGTTTGATCTTCCAATA 168599
|||||||| || || || || |||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
Score = 105 bits (116), Expect = 8e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 168713 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 168772
|||| |||||||| || | ||||| |||| |||||||| | || || ||||| |||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 168773 TTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 168832
|| | |||||| || || |||||||||||||||||||| ||||| || | |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 168833 CACTCGATCTTGCTGC 168848
| ||||| || || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 232 bits (256), Expect = 8e-56
Identities = 318/444 (72%), Gaps = 4/444 (1%)
Strand=Plus/Minus
Query 168406 CATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGT 168465
|| ||| | ||||| ||||| ||||| || ||| | || |||| |||||| || |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 168466 TTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTAC 168525
||||| || ||| | | | || || || || |||| ||||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 168526 AAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGT 168585
| || || ||||| || ||||| | || || ||||| ||||||||||| || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 168586 TTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCA 168645
|| ||||||||||| ||| |||||| | || | || || || |||||| | | |||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 168646 TGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTG 168705
|||||||| || || || ||||| || | | || | || |||||||| | |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 168706 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 168765
||||| ||||| |||||||| || | ||||| |||| |||||||| || |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 168766 GCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACAC 168825
|| ||| || | ||||||||| || |||||||||||||||||||| ||||| || ||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 168826 AACTTCCCACTCGATCTTGCTGCT 168849
||||||| || || || ||||||
Sbjct 12788 AACTTCCATCTAGACCTAGCTGCT 12765
>seq25216
Length=8180
Score = 143 bits (158), Expect = 3e-29
Identities = 184/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 168223 TTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCA 168282
|| |||||||| || ||||| | |||| || || || || || || || || | |||
Sbjct 7256 TTTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCT 7197
Query 168283 GTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATC 168342
|| ||| | | || || | |||||||| || || ||||||| ||||| || |||||
Sbjct 7196 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 7137
Query 168343 TCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCC 168402
|| || || ||||||| |||| | || ||||| |||||||||| || || ||||| ||
Sbjct 7136 TCTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCA 7077
Query 168403 TTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGA 168462
|| || ||| | ||||| | ||| ||||| || ||| | || ||||||||||| ||
Sbjct 7076 TTTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 7017
Query 168463 AGTTTGGTTACTTC 168476
|||||| || ||
Sbjct 7016 TCTTTGGTAACCTC 7003
>seq59
Length=339703
Score = 143 bits (158), Expect = 3e-29
Identities = 187/259 (72%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 168316 TTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAA 168375
|| ||||||| ||||| || ||| | || || || ||||||| |||| | || |||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 168376 GCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGT 168435
||||||||||| || || ||||| || || || ||| | |||| ||||| ||||| ||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 168436 GGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACG 168495
||| | || |||| |||||| || |||||| || || | | |||| || ||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 168496 ACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAAC 168555
|| |||| ||||| || | ||||||| ||| || ||||| ||||| || || ||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 168556 ATCGTAGCCGCTCATGGTT 168574
|| ||||| |||||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq3927
Length=49767
Score = 109 bits (120), Expect = 6e-19
Identities = 176/252 (70%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 169595 TGGAACTTTGTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTT 169654
|||| ||||| || || ||||| || |||| | | || ||||| ||| | | || |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 169655 GAATTGGCACGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATT 169714
||| | || || | || | || ||||||||||| || ||||| | |||||| |||
Sbjct 26067 GAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAATT 26126
Query 169715 GCTGTATTTGTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCT 169774
|| | ||||| || ||||| || || ||||| || ||||| |||||||||||
Sbjct 26127 GCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCG 26186
Query 169775 CCCTCCTTTGGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAAC 169834
|| ||||| ||| || | || ||| | ||| | | || | ||||| || || ||
Sbjct 26187 CCTAGTTTTGGTGTAGCATCTATATTC-GATTCATCCTCTTTTTTCAAGGGTTTCATAAT 26245
Query 169835 TGGACGTTGAAT 169846
||||| ||||||
Sbjct 26246 TGGACATTGAAT 26257
>seq8630
Length=23577
Score = 105 bits (116), Expect = 8e-18
Identities = 104/133 (78%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTA-GCCGCTCATGGTTACTT 168578
|||||||| || || ||||| || ||||| || || |||||| || ||||||||||| ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 168579 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCT 168638
||||| || ||||||||||| ||| |||||||| || || || || || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 168639 TGCTGCATGGCCT 168651
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq4835
Length=43218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579
||||||| || || ||||| || ||||| || || |||||||| ||||||||||| ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 168580 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTC----CTTGCACTTCTT 168635
|| | || ||||||||||| ||| |||||||| || || || || || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 168636 CCTTGCTGCATGGCCT 168651
| || || ||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571690318493520
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