Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 389 4e-103
seq8546 273 2e-68
seq29420 199 4e-46
seq25216 183 3e-41
seq59 183 3e-41
seq8630 111 2e-19
seq78858 89.7 6e-13
seq4835 87.8 2e-12
seq13559 84.2 2e-11
>seq5412
Length=31808
Score = 389 bits (430), Expect = 4e-103
Identities = 505/693 (73%), Gaps = 10/693 (1%)
Strand=Plus/Minus
Query 163831 GGTTCGGCGTTCTGATGATCCCTACGCTGCTTG-CAGCAACCATCTGT-TTCATCGTCGC 163888
|||| |||||| ||||||| ||||| || ||| | ||||| ||| || || || | ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTAC-CTTATTGACCGCAAC-ATCCGTATTTATTATAGC 15226
Query 163889 CTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCT 163948
|||| | |||||||| || || || || ||||||||||||||||||||| || || ||
Sbjct 15225 CTTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCT 15166
Query 163949 CATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCT 164008
| || || ||||| || ||||||||||| || ||| | | ||| || ||| |
Sbjct 15165 TCTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTT 15106
Query 164009 TCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCC 164068
||||| || || || |||||||| ||||| ||||||||||| | ||||| ||||||||
Sbjct 15105 GCACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCC 15046
Query 164069 TTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTG 164128
| | || | || || |||||| | | ||| | | |||||||||||||||||
Sbjct 15045 ATATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTG 14986
Query 164129 GGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGT 164188
|||||| || |||||| |||||||| ||||||||| |||||| || || || || ||
Sbjct 14985 GGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGT 14926
Query 164189 TGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGC 164248
||| | || | || || ||| || |||| || | ||| |||| || ||| | |
Sbjct 14925 TGCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGG 14866
Query 164249 AATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAA 164308
||||| || || || ||||| || ||||||| |||| | || ||||| || ||||||||
Sbjct 14865 TATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAA 14806
Query 164309 CATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTT 164368
|||||| |||||||| || || ||| | ||||| ||||| ||||| | ||| | || ||
Sbjct 14805 CATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATT 14746
Query 164369 CAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGA 164428
||| ||| |||||| |||| || || || | | |||||||| |||| |||
Sbjct 14745 CAG------GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGA 14692
Query 164429 GTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGC 164488
|| || | ||||||| | |||||||||| ||||| || || || || || || ||
Sbjct 14691 ATCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGC 14632
Query 164489 TCACGGTTACTTTGGTCGTCTGATCTTCCAATA 164521
||| ||||| ||||| || | |||||||||||
Sbjct 14631 TCATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
Score = 102 bits (112), Expect = 9e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 164635 TCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACG 164694
|||| |||||||| || | | ||| |||| |||||||| | || |||||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 164695 TTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCC 164754
|| | |||||| || || ||||||||||||||||| || ||||| |||| |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 164755 CTCTGGATCTCGCTGC 164770
|||| || || || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 273 bits (302), Expect = 2e-68
Identities = 327/444 (74%), Gaps = 4/444 (1%)
Strand=Plus/Minus
Query 164328 CATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCT 164387
|| ||| | ||||| ||||| ||||| ||||| || | ||||||| ||||| ||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 164388 CTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTAC 164447
|||| || ||| || | | |||||||| |||| | | ||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 164448 AAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGT 164507
| ||||||||||| || ||||| | || ||||| || ||||| ||||| ||||| ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 164508 CTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCA 164567
| ||||||||||| ||| |||||| | || | ||| || || |||||| | | |||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 164568 TGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTG 164627
|||||||| || || || ||||| || | | ||| || || |||||||| | |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 164628 AACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGG 164687
||||| ||||| |||||||| || | | ||| |||| |||||||| || ||||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 164688 GCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCAC 164747
|| || || | ||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 164748 AACTTCCCTCTGGATCTCGCTGCT 164771
||||||| ||| || || ||||||
Sbjct 12788 AACTTCCATCTAGACCTAGCTGCT 12765
>seq29420
Length=7120
Score = 199 bits (220), Expect = 4e-46
Identities = 260/360 (72%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 163898 TGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGG 163957
|||||| || || || || ||||||||||||||||||||| | || || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 163958 TAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTA 164017
||||| || |||||||||| || |||| | || ||| || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 164018 CCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACT 164077
|| || |||||||| ||||| ||||||||||| | ||||| |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 164078 TGTCGTCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTC 164137
|| || |||||| | | ||| | | |||||||||||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 164138 TTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGC 164197
|| |||||| |||||||| ||||||||| |||||| || || | || ||||| || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 164198 ATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCT 164257
| | | ||| || |||| || | |||||||| || ||||| | ||||| ||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq25216
Length=8180
Score = 183 bits (202), Expect = 3e-41
Identities = 213/286 (74%), Gaps = 1/286 (0%)
Strand=Plus/Minus
Query 164146 TTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAG 164205
|||||||||| ||||||||| | |||| || || || || ||||| || || | || |
Sbjct 7255 TTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTG 7196
Query 164206 TCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCT 164265
| ||| || |||| || | |||||||| || ||||| | ||||| || || || |
Sbjct 7195 TTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTT 7136
Query 164266 CTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCT 164325
|||| || ||||||| |||| | || ||||| | |||||||||||||| |||||||| |
Sbjct 7135 CTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCAT 7076
Query 164326 TCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTT 164385
| || ||| | ||||| | ||| ||||| ||||| || || |||||||| ||||| ||||
Sbjct 7075 TTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 7016
Query 164386 CTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTC 164431
|| |||| || || | | | || |||||||| ||| ||| ||
Sbjct 7015 CTTTGGTAACCTC-GAGTTTGATCAGGAAACCACATAAAATGAATC 6971
>seq59
Length=339703
Score = 183 bits (202), Expect = 3e-41
Identities = 197/261 (75%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 164236 CGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCC 164295
|||| ||||| | ||||| || || | ||||| || ||||||| |||| | || ||||
Sbjct 52307 CGTTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCC 52366
Query 164296 AAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTG 164355
| || |||||||||||||| |||||||| || || ||| | |||| ||||| ||||| |
Sbjct 52367 ATGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCG 52426
Query 164356 GCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAA 164415
|||| || || ||||||| ||||| |||||| |||| || || || || | ||||
Sbjct 52427 GCGGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAA 52486
Query 164416 CCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACA 164475
|||| |||| ||| || || | ||||||| |||||||||||| ||||| || || |
Sbjct 52487 CCACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATA 52546
Query 164476 ACATTGTTGCCGCTCACGGTT 164496
| ||||| || |||| ||||
Sbjct 52547 ATATTGTAGCTACTCATGGTT 52567
>seq8630
Length=23577
Score = 111 bits (122), Expect = 2e-19
Identities = 123/163 (75%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 164412 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACA 164471
||| |||| ||| ||| ||| || | |||||||| ||||||||||| || |||||
Sbjct 7467 GAACCCACATAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGGAAACT 7526
Query 164472 TACAACATTGTT-GCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATT 164530
|| || || || || ||||| ||||| |||||||| | ||||||||||| ||| ||
Sbjct 7527 TAGAATATCGTACGCTGCTCATGGTTATTTTGGTCGATTCATCTTCCAATATGCTAGTTT 7586
Query 164531 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCT 164573
|||||| || ||||| || || ||||| | || || ||||||
Sbjct 7587 CAACAATTCTCGTTCTTTACATTTCTTATTAGCCGCTTGGCCT 7629
>seq78858
Length=18568
Score = 89.7 bits (98), Expect = 6e-13
Identities = 124/170 (73%), Gaps = 4/170 (2%)
Strand=Plus/Plus
Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265
||||||||| | | || |||||||||||||| ||||| || || || | || |||
Sbjct 929 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGGTTG-TCCGGTCTATTGCTCTTT 987
Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325
|| ||| ||| | ||| | || |||||| |||| || | || || | || |||
Sbjct 988 CCGTGTGCGTATTTCGCTGTAGGAGGTTGGTTTACGGGTTCAACCTTTGTAACTTCCTGG 1047
Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGG-AGGGTGCAAACTTTCTTA 165374
|||||||| || ||||| ||||||||| ||| ||| ||||| |||||||
Sbjct 1048 TATACTCATGGTTTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCTTA 1095
>seq4835
Length=43218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501
||||||| ||||||||||| || ||||| || || || || || ||||| ||||| |||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 164502 GGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTC----CTTGCACTTCTT 164557
|| | | ||||||||||| ||| |||||||| || ||||| || || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 164558 CCTTGCTGCATGGCCT 164573
| || || ||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
>seq13559
Length=16232
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 164357 CGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTC-GTGAAA 164415
||| || || |||||||| ||||| |||||| |||| || ||| ||| | || | ||||
Sbjct 5672 CGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTA-GCTTGATCAGGGAAA 5614
Query 164416 CCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACA 164475
||| |||| ||| | || | |||||||| ||||||||||| || |||| || |
Sbjct 5613 CCATAGAAAATGAATATGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGAAAACTTAGA 5554
Query 164476 ACATTGTTGCCGCTCACGGTTACTT 164500
| || || || ||||| ||||| ||
Sbjct 5553 ATATCGTAGCTGCTCATGGTTATTT 5529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554226541113360
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