Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 347 1e-90
seq8546 210 2e-49
seq59 194 2e-44
seq25216 187 3e-42
seq29420 154 2e-32
seq4835 91.5 2e-13
seq8630 89.7 6e-13
>seq5412
Length=31808
Score = 347 bits (384), Expect = 1e-90
Identities = 499/704 (71%), Gaps = 6/704 (1%)
Strand=Plus/Minus
Query 168537 GGTTCGGTGTCTTAATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCAT 168596
|||| || || || ||||| || ||||| || ||| || | || ||| | || |
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAACATCCGTATTTATTATAGCCT 15224
Query 168597 TTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAA 168656
| |||||||| || || || ||||| || || || | |||||||| || ||||
Sbjct 15223 TCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTTC 15164
Query 168657 TGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTAC 168716
| || |||||||| || ||||| ||||| || ||| ||| || || ||| | |
Sbjct 15163 TTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTGC 15104
Query 168717 ACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTT 168776
|||| || ||||| |||||||| || | | ||||| |||||||| ||||||||||| |
Sbjct 15103 ACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCAT 15044
Query 168777 ACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGG 168836
| || | | | || |||||| || | || | || ||||||||| | ||||||
Sbjct 15043 ATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGG 14984
Query 168837 AATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTAT 168896
|| | | | | || |||||| | |||||||| |||||| |||||||| || ||
Sbjct 14983 AACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTTG 14924
Query 168897 CTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTA 168956
| | || ||| || ||| | | |||||| ||||| | || || ||| ||||||
Sbjct 14923 CGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGTA 14864
Query 168957 TGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACA 169016
||||||||||||||||||| || |||||||||||| | |||||||| || ||||||||||
Sbjct 14863 TGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACA 14804
Query 169017 TTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCT 169076
| |||||||| || || || ||| ||| ||||| ||| | |||| || | ||||||
Sbjct 14803 TCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC- 14745
Query 169077 CCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAAT 169136
| ||||||||| | ||||| || | | ||||| || || || || | ||||
Sbjct 14744 -----AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAAT 14690
Query 169137 CTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCAC 169196
|| || | ||||||| | | |||||||| ||||| || |||||||| || || || |
Sbjct 14689 CTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCTC 14630
Query 169197 ATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAAC 169240
|||| || || || ||||||||||||| ||| | |||||||
Sbjct 14629 ATGGTTATTTTGGCCGATTAATCTTCCAATATNTCAATTTCAAC 14586
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 169343 AACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTA 169402
|| || |||||||| || || ||| | | ||| | ||| ||| |||| ||| |
Sbjct 14594 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATT 14535
Query 169403 CTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCA 169462
||||| | | ||||||||||||||||| |||||||| ||||| |||| ||||||||
Sbjct 14534 ATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCCCT 14475
Query 169463 CTAGACTTAGCA 169474
|| ||| |||||
Sbjct 14474 CTCGACCTAGCA 14463
>seq8546
Length=31398
Score = 210 bits (232), Expect = 2e-49
Identities = 313/442 (71%), Gaps = 8/442 (2%)
Strand=Plus/Minus
Query 169034 CATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCA 169093
|| ||| ||| ||||| ||| | ||||| || || ||||| | |||||||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 169094 CTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTAC 169153
| ||||| ||| | | ||||| || || || || | |||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 169154 AAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGA 169213
| || |||||||| || ||||| | |||||||| || || ||||| || || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 169214 TTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTT--CACTTCTTCCTAGCAG 169271
|| |||||||| ||||| ||||||||| | || | |||| || |||||| ||| |
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTC--TCATTCTTTACATTTCTTCTTAGTTG 12967
Query 169272 TGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACT 169331
| || || ||| || ||||||| || || | ||||| |||| |||||||| | |
Sbjct 12966 CTTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCC 12907
Query 169332 TGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACAT 169391
| ||||| || || || |||||||| || || ||| | | ||| | ||| |
Sbjct 12906 TAAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT----ATT 12851
Query 169392 GGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTC 169451
||| || | ||||| | || ||||||||||||||||| |||||||| ||||| ||||
Sbjct 12850 GGGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 12791
Query 169452 ACAACTTCCCACTAGACTTAGC 169473
| ||||||| |||||| ||||
Sbjct 12790 ATAACTTCCATCTAGACCTAGC 12769
>seq59
Length=339703
Score = 194 bits (214), Expect = 2e-44
Identities = 197/257 (77%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 168944 TTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAA 169003
|| ||||||||||||||||||||| ||||||| || |||||||||||| | ||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 169004 GCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGT 169063
|| ||||||||||| |||||||| || || || ||| | | ||||| ||| | |||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 169064 GGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACT 169123
|| || |||||| | ||||||||||| | ||||| || | | || || || ||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 169124 ACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAAT 169183
|| || | |||||| || | ||||||| ||| |||||||| ||||| || ||||||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 169184 ATTGTTGCAGCACATGG 169200
||||| || | |||||
Sbjct 52549 ATTGTAGCTACTCATGG 52565
>seq25216
Length=8180
Score = 187 bits (206), Expect = 3e-42
Identities = 192/251 (76%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 168854 GGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTA 168913
|||||| | |||||||| | |||| |||||||| || || | || || ||| ||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 168914 TTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCT 168973
||| | | |||||| ||||||| || || |||||||||||||||||||||||||||
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 168974 GGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTC 169033
|| || |||||||||||| | |||||||| | ||||||||||| |||||||| || ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 169034 CATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCA 169093
|| ||| ||| |||| ||| | ||||| || || |||||| || |||||||||||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 7014
Query 169094 CTTGTAACATC 169104
| ||||| ||
Sbjct 7013 TTGGTAACCTC 7003
>seq29420
Length=7120
Score = 154 bits (170), Expect = 2e-32
Identities = 253/365 (69%), Gaps = 0/365 (0%)
Strand=Plus/Plus
Query 168601 TGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTA 168660
|| ||| || || || ||||| || || || | |||||||| | || |||| | |
Sbjct 3412 TGTTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCA 3471
Query 168661 TGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTT 168720
|||||||| || ||||| |||| || |||| |||| || || ||| | |||||
Sbjct 3472 CGGAAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTT 3531
Query 168721 CTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCA 168780
|| ||||| |||||||| || | | ||||| |||||||| |||||||||||||| |
Sbjct 3532 TTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 3591
Query 168781 GTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATT 168840
| | | || |||||| || | || | || ||||||||| | |||||||| |
Sbjct 3592 GCTAAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 3651
Query 168841 ATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGC 168900
| | | || |||||| | |||||||| |||||| ||||||| || || | ||
Sbjct 3652 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGC 3711
Query 168901 AGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCC 168960
|| | | | ||| | | |||||| ||||||| || || ||||||||||||||
Sbjct 3712 TGCTACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCC 3771
Query 168961 TCTAG 168965
|||||
Sbjct 3772 TCTAG 3776
>seq4835
Length=43218
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207
||||||| || |||||||| || ||||| || ||||| || || || ||||| || ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 169208 GGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245
|| ||||| |||||||| ||||| ||||||||||| ||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATC 9156
>seq8630
Length=23577
Score = 89.7 bits (98), Expect = 6e-13
Identities = 80/99 (81%), Gaps = 1/99 (1%)
Strand=Plus/Plus
Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTT-GCAGCACATGGATACTT 169206
|||||||| || |||||||| || ||||| || ||||| || || || ||||| || ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 169207 CGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245
||| |||| |||||||| ||||| ||||||||||| ||
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTC 7595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561706922781120
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