Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 392 4e-104
seq29420 271 9e-68
seq8546 217 2e-51
seq25216 183 3e-41
seq59 134 2e-26
seq3927 132 5e-26
seq8630 87.8 2e-12
seq8848 82.4 9e-11
>seq5412
Length=31808
Score = 392 bits (434), Expect = 4e-104
Identities = 473/644 (73%), Gaps = 6/644 (1%)
Strand=Plus/Minus
Query 164857 TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTC 164916
||||||| || ||||| |||||||| || || || |||||||||||||||||||||||
Sbjct 15236 TTTATTATAGCCTTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTT 15177
Query 164917 GCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAAC 164976
|| ||||| | ||||| ||||| || ||||||||||| | ||| | ||| |
Sbjct 15176 TTTGGATCTCTTCTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCT 15117
Query 164977 GCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTAC 165036
|| || || | ||||| ||||| || |||||||||||| | | ||||||||||| |||
Sbjct 15116 GCTATAGGTTTGCACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATAC 15057
Query 165037 AACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATG 165096
|| |||||||| || || | |||| || |||||| | | ||||||||||| ||||||
Sbjct 15056 AATGGTGGTCCATATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATG 14997
Query 165097 GGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATAT 165156
||||||||||||||||| || ||| || |||||||| ||||||||| || || |||
Sbjct 14996 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTAT 14937
Query 165157 AGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGT 165216
|| ||||| || ||||| | || |||||| || |||| || | ||| |||| ||
Sbjct 14936 TCAGCCCCTGTTGCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGC 14877
Query 165217 TTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAA 165276
|| ||| ||||||||||||| || || ||||||||||| |||| ||| | || |||||
Sbjct 14876 TTTTCTAATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAG 14817
Query 165277 GCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGT 165336
|| || || ||||| |||||||| || || |||||| | ||||| ||||| |||||||
Sbjct 14816 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGAC 14757
Query 165337 GGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACA 165396
|| | || ||| | |||||| | | || || || | || | || ||
Sbjct 14756 GGCTACCTATTC------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACC 14703
Query 165397 ACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAAC 165456
|| |||| || | || | ||||| | | |||| ||||| |||||||| |||||
Sbjct 14702 ACAGAAAATGAATCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAAT 14643
Query 165457 ATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATA 165500
||||| ||||| || || || || || || | || ||||||||
Sbjct 14642 ATCGTAGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
Score = 96.9 bits (106), Expect = 4e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 165614 TCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACG 165673
|||| |||||||| ||| | ||||||||||| | || ||||||||||||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 165674 TTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCC 165733
|| | ||||| || || |||||||||||||||||||| ||||| |||| |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 165734 CCCTCGACCTCGCTGC 165749
| |||||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq29420
Length=7120
Score = 271 bits (300), Expect = 9e-68
Identities = 276/360 (77%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 164877 TGCTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGG 164936
|||||| || || || ||||||||||||||||||||||| | || ||||| | ||||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 164937 TAACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTA 164996
||||| || |||||||||| | ||||| ||||| || || || | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 164997 TCCTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTT 165056
||| || |||||||||||| | | ||||||||||| ||||| ||||||||||| || |
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 165057 GGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTC 165116
||| || |||||| | | ||||||||||| |||||||||||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 165117 TTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGC 165176
|| ||| || |||||||| ||||||||| || || ||| | ||||| || |||||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 165177 TGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCT 165236
| | | ||||| || |||| || | |||||||| || || |||||||||||||||||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq8546
Length=31398
Score = 217 bits (240), Expect = 2e-51
Identities = 319/446 (72%), Gaps = 8/446 (2%)
Strand=Plus/Minus
Query 165307 CACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT 165366
|||||| | ||||| ||||| |||||||| || || | ||| || ||||||||| |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 165367 CTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAG--AACTACGGTT 165424
| || || || | || | || || || |||| | | | || | || | ||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA-ATAAA-TCCGCTAATGAAGGTT 13087
Query 165425 ATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTC 165484
| | ||||| ||||| || || || | || || || ||||| || || || || || |
Sbjct 13086 ACAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCC 13027
Query 165485 GTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAG 165544
| |||| |||||||| || |||||| |||| | ||| | || |||||| | | |
Sbjct 13026 GATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTG 12967
Query 165545 CATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACC 165604
| ||||||||||| ||||| ||||| ||| || | ||| |||| || |||||||| | ||
Sbjct 12966 CTTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCC 12907
Query 165605 TGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTT 165664
| ||||| ||||| |||||||| ||| | ||||||||||| | || || ||
Sbjct 12906 TAAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAAT---TA-TT 12851
Query 165665 GGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTC 165724
|||| || || | ||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct 12850 GGGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 12791
Query 165725 ACAACTTCCCCCTCGACCTCGCTGCT 165750
| ||||||| || ||||| ||||||
Sbjct 12790 ATAACTTCCATCTAGACCTAGCTGCT 12765
>seq25216
Length=8180
Score = 183 bits (202), Expect = 3e-41
Identities = 182/236 (77%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 165127 GGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTT 165186
|||||||| ||||||||| | || ||| || ||||| || |||||| | || |||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 165187 TTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCT 165246
||| || |||| || | |||||||| || || ||||||||||||||||| || || |||
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 165247 GGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTC 165306
|||||||| |||| ||| | || ||||| | || || ||||| |||||||| || ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 165307 CACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362
|||||| | ||||| | ||| |||||||| || || || ||| ||||||||||||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 7018
>seq59
Length=339703
Score = 134 bits (148), Expect = 2e-26
Identities = 184/257 (72%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 165217 TTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAA 165276
|| ||||||||||||||||| || | ||||||||||| |||| ||| | || |||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 165277 GCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGT 165336
|| || || ||||| |||||||| || || |||||| | |||| ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 165337 GGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACA 165396
|| || || ||| || ||||||||| | | || || || | | | || ||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 165397 ACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAAC 165456
|| |||| || | || | ||||| | |||||| ||||| |||||||| |||||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 165457 ATCGTCGCTGCCCACGG 165473
|| || ||| | || ||
Sbjct 52549 ATTGTAGCTACTCATGG 52565
>seq3927
Length=49767
Score = 132 bits (146), Expect = 5e-26
Identities = 183/252 (73%), Gaps = 3/252 (1%)
Strand=Plus/Plus
Query 166449 TGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTT 166508
||| | |||||||||||||| || ||||||| ||||| ||||| ||| | || || |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 166509 GAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTAT 166567
||| | ||||| ||| || | || || || |||||||| || || | |||||| ||
Sbjct 26067 GAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAAT 26125
Query 166568 TGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGC 166627
||| | || ||| || ||||| || || || || ||||| || ||||||| || ||
Sbjct 26126 TGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGC 26185
Query 166628 TCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAA 166687
|| ||| || || || | || || |||||| |||| || ||||||| || || ||
Sbjct 26186 GCCTAGTTTTGGTGTAGCATCTATATT-CGATTCATCCTCTTTTTTCAAGGGTTTCATAA 26244
Query 166688 CTGGACACTGAA 166699
|||||| ||||
Sbjct 26245 TTGGACATTGAA 26256
>seq8630
Length=23577
Score = 87.8 bits (96), Expect = 2e-12
Identities = 100/133 (75%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 165421 GGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGT-CGCTGCCCACGGGTACTT 165479
||||| || ||||| ||||| || || || || || ||||| |||||| || || || ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 165480 CGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCT 165539
||||| |||| |||||||| || ||||||||||| ||||| | || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 165540 CGCAGCATGGCCT 165552
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq8848
Length=70292
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 161701 GTCAGTAGCTCAGCGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGATCCC 161760
||| ||||||||| ||||||||| ||| | |||||||| |||||||||||||| |||
Sbjct 52432 GTCTGTAGCTCAGTGGATAGAGCGTCTGTTTCCTAAGCAGAAGGTCGTAGGTTCGACCCC 52491
Query 161761 TACCTGACCCGTT 161773
|||||||| ||||
Sbjct 52492 TACCTGACGCGTT 52504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560929905698560
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