Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 383 2e-101
seq8546 260 2e-64
seq29420 208 9e-49
seq59 185 1e-41
seq25216 181 1e-40
seq8630 114 1e-20
seq4835 89.7 6e-13
seq13559 86.0 7e-12
seq8085 86.0 7e-12
>seq5412
Length=31808
Score = 383 bits (424), Expect = 2e-101
Identities = 502/693 (72%), Gaps = 8/693 (1%)
Strand=Plus/Plus
Query 84218 ATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTC 84277
||| |||||||| | || || || || || |||||||| || ||||||||||| || ||
Sbjct 14598 ATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTCTCTTC 14657
Query 84278 TTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAG 84337
|||||||| | | ||||||| | || || |||||||||| ||||| | ||| |
Sbjct 14658 CTCTTGACCAAGCCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAA 14717
Query 84338 AGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGC 84397
| || || || | ||||||||| | |||||| || |||||||||||||
Sbjct 14718 ACTCGAGGTTACCAAAGAACCATGCCT------GAATAGGTAGCCGTCGAATACACCAGC 14771
Query 84398 AACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCAT 84457
|| || ||||||||||| || |||||||||||||| || || |||||||| |||| |||
Sbjct 14772 TACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCAT 14831
Query 84458 GTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAA 84517
| ||||||| || || || || || || ||||| |||| ||| || |||| || |
Sbjct 14832 GAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATTAGAAAAGCTTCCTTAACCAAT 14891
Query 84518 AGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGAT 84577
|| || | | ||| ||||||| || | ||||| || || || || |||||| ||
Sbjct 14892 TGGGTAGATCAAGAAAACAGCAGTAGCAGTCGCAACAGGGGCTGAATACGCAACAACAAT 14951
Query 84578 CCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGC 84637
||| || |||||||| ||||| | ||||||||| ||||||||||||||| | | |
Sbjct 14952 CCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTAC 15011
Query 84638 ACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTC 84697
||||| | ||||||||| |||| || | ||| || |||||||| |||| |||||| ||
Sbjct 15012 ACCAAGTAAGAAGTGAAAAACAATTAGCTCATATGGACCACCATTGTATAACCATTCATC 15071
Query 84698 CATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAAC 84757
| | ||| |||||||| || ||||| || || | ||| |||||| | | | |||
Sbjct 15072 AACAGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCTATAGCAGCAAAAGTCTGAAT 15131
Query 84758 TACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGAT 84817
| ||||||||| || || ||||||||||| | ||||| ||| || || ||||| ||
Sbjct 15132 AATGGCACCAGAGATAATATTGTTTCCGTAAAGAAGAGATCCAAAAACAGGTTCACGAAT 15191
Query 84818 ACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAG 84876
||| |||||||| || || || ||| ||| ||| || || || || || || || || |
Sbjct 15192 ACCATCAATATCTACCGGAGGAGCAGCAATGAAGGCTATAATAAATACGGA-TGTTGCGG 15250
Query 84877 CAAGTAGAGTTGGAATCATAAGAGTTCCAAACC 84909
| || || |||||||| | | |||||||
Sbjct 15251 TCAATAAGGTAGGAATCATCAAAACGCCAAACC 15283
>seq8546
Length=31398
Score = 260 bits (288), Expect = 2e-64
Identities = 314/427 (74%), Gaps = 4/427 (1%)
Strand=Plus/Plus
Query 83986 GGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGTA 84045
|||||||||| || |||||||| ||||| |||||||||||||| || || |||| |
Sbjct 12782 GGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCGCGGTTAATAA 12841
Query 84046 CATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTAA 84105
||||||||| ||| ||||| ||| ||||| || | | || ||||| || |
Sbjct 12842 TATCGGCCCAATAATT----ACACGACCTTGACTATCAACTACAGATTGGTTGAAATTGA 12897
Query 84106 ATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCA 84165
| || || || |||||||||| || |||| ||| | || || |||||| || || || |
Sbjct 12898 AGCCGTTTAGGATAAATGCCATAGTACTAATACCTAAAGTAGTAAACCATATACCTACTA 12957
Query 84166 CTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGA 84225
| ||||||||| | ||||| || || | |||| || || |||||| |||||| ||||
Sbjct 12958 CAGGCCAAGCAACTAAGAAGAAATGTAAAGAATGAGAATCGTTGAAACTAGCATATTGGA 13017
Query 84226 AGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGAC 84285
|||| | || || || || || |||||||| |||||||| | ||||||||| |||||||
Sbjct 13018 AGATGAATCGGCCAAAATAACCATGAGCAGCTACAATATTCTTAGTTTCCTCCTCTTGAC 13077
Query 84286 CGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAG 84345
| || ||||||| | || || ||||||||| ||||| | ||| | | ||| |
Sbjct 13078 CAAATCTGTAACCTTCATTAGCGGATTTATTTTCTGTGGTTTCCCTGATCAAACTAGAGG 13137
Query 84346 TGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCA 84405
| || | ||||||||||| || ||||| | || |||||||||||||| || || |
Sbjct 13138 TTACCAAAGAACCATGCATAACACTGAATATGGAGCCGCCGAATACACCAGCTACGCCTA 13197
Query 84406 ACATGTG 84412
|||||||
Sbjct 13198 ACATGTG 13204
>seq29420
Length=7120
Score = 208 bits (230), Expect = 9e-49
Identities = 264/363 (73%), Gaps = 0/363 (0%)
Strand=Plus/Minus
Query 84483 AGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGAT 84542
|| ||||| |||||||| || ||||| || | || || | | ||| | || ||
Sbjct 3774 AGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAATAGTAGTA 3715
Query 84543 GCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATAT 84602
|| || ||||| ||| | || || |||||| ||||| || |||||||| ||||| |
Sbjct 3714 GCAGCCGCAACAGGAACTGAATACGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAA 3655
Query 84603 GAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACA 84662
||||||||| ||||||||||||||| | | |||||| | |||||| || |||
Sbjct 3654 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGCAAAACATTT 3595
Query 84663 AGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGA 84722
|| | |||||| |||||||| |||| |||||| || | | ||| |||||||| || |||
Sbjct 3594 AGCTCATAAGGACCACCATTGTATAACCATTCATCAACAGATGCAGCTTCCCATATTGGA 3535
Query 84723 TAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTT 84782
|| || || | ||| |||||| ||| | |||| | | ||||||| || || ||||||
Sbjct 3534 TAAAAGTGCAAACCTATAGCAGCAGAAGTCGGAATAATGTCACCAGAGATAATATTGTTT 3475
Query 84783 CCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCA 84842
|||| | ||||| |||| || || ||||| ||||| |||||||| || || || |||
Sbjct 3474 CCGTGAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGAGCA 3415
Query 84843 CCA 84845
||
Sbjct 3414 ACA 3412
>seq59
Length=339703
Score = 185 bits (204), Expect = 1e-41
Identities = 195/257 (76%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 84246 CCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTT 84305
|| |||| ||| |||||||||||||| || || |||||||| ||| ||||||| | ||
Sbjct 52565 CCATGAGTAGCTACAATATTATAAGTCTCTTCCTCTTGACCAAACCTGTAACCTTCATTA 52506
Query 84306 TGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATT 84365
|| |||||||||| ||||| | || | | || || || | |||||||||||
Sbjct 52505 GTAGATTCATTTTCTGTGGTTTCCCTAATCAAACTCGAGGTTACCAAAGAACCATGCATA 52446
Query 84366 GCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATA 84425
|| |||||| | || |||||||||||||| || | ||||||||||| || ||||||
Sbjct 52445 ACACTGAATAGGGAGCCGCCGAATACACCAGCTACGCTTAACATGTGAAATGGGTGCATA 52386
Query 84426 AGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGT 84485
|||||||| || || || ||||| |||| |||| ||||||| || || || | || ||
Sbjct 52385 AGGATGTTGTGCTCAGCATGGAATACAATCATGAAGTTGAAAGTACCAGAAACTCCTAGA 52326
Query 84486 GGCATGCCATCAGAGAA 84502
||||| |||||||| ||
Sbjct 52325 GGCATACCATCAGAAAA 52309
>seq25216
Length=8180
Score = 181 bits (200), Expect = 1e-40
Identities = 209/280 (75%), Gaps = 1/280 (0%)
Strand=Plus/Plus
Query 84313 CATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGA 84372
|||||| ||| ||||| | ||| | | || || || | ||||||||||| ||| ||
Sbjct 6975 CATTTTATGTGGTTTC-CTGATCAAACTCGAGGTTACCAAAGAACCATGCATAGCACTGA 7033
Query 84373 ATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGT 84432
|||| | || |||||||||||| | || || ||||||||||| || |||||||||||||
Sbjct 7034 ATAGGGAGCCGCCGAATACACCATCTACGCCTAACATGTGAAATGGGTGCATAAGGATGT 7093
Query 84433 TATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGC 84492
| || || | |||||| |||| |||| ||||||| || || || || || || ||||| |
Sbjct 7094 TGTGCTCAGACTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATAC 7153
Query 84493 CATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAA 84552
||||||| || ||||| || | || || | | ||| ||||||| || || ||||
Sbjct 7154 CATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCCGCAA 7213
Query 84553 CTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACC 84592
| ||||| || || |||| | ||||| || ||||||||
Sbjct 7214 CAGGAGCTGAATACGCAATAGCAATCCAAGGGCGCATACC 7253
>seq8630
Length=23577
Score = 114 bits (126), Expect = 1e-20
Identities = 127/168 (76%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 84168 GGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAG 84227
|||||||| || || || || || | ||||||| ||||||||| |||||| ||||||
Sbjct 7628 GGCCAAGCGGCTAATAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAG 7569
Query 84228 ATAAGACGACCGAAGTAGCCGTGAGCAGCA-ACAATATTATAAGTTTCCTCTTCTTGACC 84286
|| | ||||| || || || |||||||| || ||||| ||||||||||| ||||||||
Sbjct 7568 ATGAATCGACCAAAATAACCATGAGCAGCGTACGATATTCTAAGTTTCCTCCTCTTGACC 7509
Query 84287 GAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGAT 84334
|| |||||||| | || || |||||| ||| | ||| | |||
Sbjct 7508 AAATTTGTAACCTTCATTAGCGGATTCATTTTATGTGGGTTCCCTGAT 7461
>seq4835
Length=43218
Score = 89.7 bits (98), Expect = 6e-13
Identities = 101/135 (75%), Gaps = 4/135 (3%)
Strand=Plus/Minus
Query 84168 GGCCAAGCAGCCAAGAAAAAGTGGAG----AGAACGACTATTGTTGAAGGAAGCATACTG 84223
|||||||| || || || || || | ||||||| |||||||| |||||| ||
Sbjct 9193 GGCCAAGCGGCTAATAAGAAATGTAATTAAAGAACGAGATTTGTTGAAACTAGCATATTG 9134
Query 84224 GAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTG 84283
|||||| | | || || || || |||||||| || ||||| ||||||||||| |||||
Sbjct 9133 GAAGATGAATCTGCCAAAATAACCATGAGCAGCTACGATATTCTAAGTTTCCTCCTCTTG 9074
Query 84284 ACCGAACTTGTAACC 84298
||| || |||||||
Sbjct 9073 ACCAAATCTGTAACC 9059
>seq13559
Length=16232
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 84235 GACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGT 84294
|| |||| || || |||||||| || ||||| ||||||| ||| |||||||| || ||||
Sbjct 5524 GATCGAAATAACCATGAGCAGCTACGATATTCTAAGTTTTCTCCTCTTGACCAAATTTGT 5583
Query 84295 AACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTG 84354
|||| | || | |||||||| | ||||| | ||| | ||| || || | |
Sbjct 5584 AACCTTCATTAGCATATTCATTTTCTATGGTTTCCCTGATCAAGCTAGAGGTTACCAAAG 5643
Query 84355 AACCATGCATTGCAGAGAATAG 84376
|||||||||| ||| ||||||
Sbjct 5644 AACCATGCATAGCACTGAATAG 5665
>seq8085
Length=24635
Score = 86.0 bits (94), Expect = 7e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 84707 TGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACC 84766
|||| |||| || ||||| || || | ||| |||||| ||| | |||| | || |||
Sbjct 19805 TGCTACCCACATTGGATAAAATTGCAAACCTATAGCAGCAGAAGTCGGAATAATGGAACC 19864
Query 84767 AGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAAT 84826
||| | || ||||||||||| | ||||| |||| || || ||||||||||| |||||
Sbjct 19865 AGAGAAAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGGATACCATCAAT 19924
Query 84827 AT 84828
||
Sbjct 19925 AT 19926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568505822253520
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