Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4197 167 4e-36
seq270 129 1e-24
>seq4197
Length=36674
Score = 167 bits (184), Expect = 4e-36
Identities = 489/738 (66%), Gaps = 24/738 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| ||||| ||||| ||||||||||| || | |||||||| ||| |||||| |||
Sbjct 23131 CTGGTAATCCCCAACTCTCTTCTCAAAGAAATTGGCCTTCCCCTGCAAGGAGATGAGCTC 23190
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCC-ATCTGTTCCAGCA 47957
||| | || ||||| | |||||| | || || | | |||| |
Sbjct 23191 CATCCAATCAAATGGGTTTGACACACCGTACACCT-TCCCACATCCTAGCGCAGCCAGAA 23249
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||||| || |||| ||||||| |||||| |||||| ||||| | |
Sbjct 23250 GCCTATCCGCCACAAACTCTATGTATTGGCTCATGAGCACACCGTTCATCCCTATCAACG 23309
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||||| || | | |||||| ||||||||| ||| |||||| || || |
Sbjct 23310 CGCAGGGCAGCGCGTCGCACACGAACTCCCTCTCTATCTCCACCGCTTCCTTTACTAT-T 23368
Query 48078 GCTT-AACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
||| ||| || ||| | | ||||| | ||| || |||||| | || ||
Sbjct 23369 CCTTGAACCCGTTCCTCCGGAAGCTTGTTCCTCAGTAACT---CATAGATGAGACAAGCG 23425
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
|| || | ||||||||||||||| ||| ||| | | |||| |||||| || ||||||
Sbjct 23426 AAATCGCAGTGCAAGCCTTCGTCGCGGGAGATCAACTCGTTCGAGAAGGTTAGTCCAGGC 23485
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|| | || | || ||| ||||| || || || ||| |||||||||||||| ||
Sbjct 23486 ATCAGTCCTCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCAGAGAAGAAGATACCT 23545
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT--GTCTGAGATCC 48314
|| || || || || | | ||| |||| || |||| | | | ||||
Sbjct 23546 TCAACGCAGGCAAAAGCAACTATGCGCTCAGCGAAGGA----TTCTGCGGAATCA-ATCC 23600
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374
|| ||||||||||| || ||||| ||| || | || || ||||| ||||||
Sbjct 23601 AGCGGAGCGCCCAGTCGGCTTTCTTGGTGACAGCGGGAACAGTATCGATGGCGTGGAAGA 23660
Query 48375 GC---TTCTTGCACTCACCTGCGTC-CGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
|| | ||| ||| | ||| || | || ||| ||| || ||||||
Sbjct 23661 GCCGGTGCTT---CTCGGACGAGTCTCGAATCAG-GGTTTCGAGAAGAAGGCTGTACATT 23716
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|||||||| | |||||| || ||||||||||| ||||||||||| | ||||| | |||
Sbjct 23717 TCAGAGTGGATATTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGAAACC 23776
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
|| | || | ||| ||| ||||| |||||||| || ||||| || || || ||
Sbjct 23777 TGGATCTCCTTCATGAACCTC-CCAGCGAGATTCTCGAGCACGATCCCGTCGGAGGCTGC 23835
Query 48550 AAAGAAGGCAAGGACATG 48567
|||||||| ||||||||
Sbjct 23836 GAAGAAGGCGAGGACATG 23853
>seq270
Length=105985
Score = 129 bits (142), Expect = 1e-24
Identities = 558/864 (65%), Gaps = 39/864 (5%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || ||||| ||||||||||| || |||||||| | || ||||| ||
Sbjct 91503 CTGGTAGTCGCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAATGAGATAAGATC 91562
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCA 47957
||| | || ||||||||| |||||| | || |||| | ||| ||
Sbjct 91563 CATCCAATCAAACGGGTTGGGTACACCGTACACCT-TCCCACACCCAAGCGCAACCAACA 91621
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| ||| || || |||| ||||| | ||| || | ||||| || || |
Sbjct 91622 GCCTATCAGCTACAAACTCAATGTACTCACTCATCAGTTTTCCATTCATCCCAATCA--- 91678
Query 48018 ACACG---GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
|| || |||| || | | |||||||||||| |||| ||| || || | ||| |
Sbjct 91679 ACGCGCATGGCAGCGCGTCACAAATAAACTCCTTCTCGATCTCCACCGCATCTCTCACGA 91738
Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
|| || || ||| || | | || || |||| | | |||| || || |
Sbjct 91739 TCCCTTTTACTCGGTCTTCAGGAAGCTTCTTCTTCAGGATTTCG---TAGATCAAACAAG 91795
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
|||| || | ||| ||||||||||| | | || ||| ||||||||||| | || |
Sbjct 91796 CAAAATCACAGTGTAAGCCTTCGTCTCTGGATATAAGCTCGTTGGAGAAGGTCAATCCTG 91855
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | | ||| |||||||| | || ||| || |||||||||||||
Sbjct 91856 GCATCAGACCGCGTTTTTTTAGCCAGAATACGGCGCAGAAGCTTCCGGAGAAGAAGATGC 91915
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
| ||||| ||||| ||| || | ||| |||| || || || |||||
Sbjct 91916 CTTCCACGCAAGCGAAAGCGACGATTCGCTCGGCGAAGGATTCGGAGGAATC---GATCC 91972
Query 48315 AG-GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
| | ||| ||||| | |||||||| ||| | || || || || || || |||||
Sbjct 91973 ATCGCAAG-GCCCACTGCGCCTTCTTTGTGACGGCAGGGATGGTGTCAATTGCGTGGAAG 92031
Query 48374 AGC---TTCTTGCACTCACCTGCGTCCGCAACATAG-GT---AGTGAGCAGCTTTGCGTA 48426
|| | ||| ||| | | |||| || ||| || | |||| || | |||
Sbjct 92032 AGGCGGTGCTT---CTCGTCGGAGTCCCGAAT-TAGCGTTTGAATGAGGAGGCT---GTA 92084
Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486
||||||||| || | ||||| | ||||||||||| || |||||||| | ||||| |
Sbjct 92085 CATCTCAGAATGGATGTTCTCAACTGCGATCTGGAAACCATAGAAGGCGCGAGCCTCGGA 92144
Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAG 48545
||||| | || | ||| || ||| || || ||||| || || || || || |
Sbjct 92145 GACCTGGATATCATTCATGAACCT-TCCGGCGAGGTTCTCGAGAACGATTCCGTCGGAGG 92203
Query 48546 CAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCC 48605
| || |||||||| ||||| || | |||||| ||||| | ||| |||| || |
Sbjct 92204 CGGCGAAGAAGGCGAGGACGTGAGAGATGAAATGTTTCTCGTCGGTGGTTAGAG--TTTC 92261
Query 48606 AGCCCTGT-ACG----TCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
||| || ||| |||| || || || || || | ||||||||||| ||
Sbjct 92262 CTCCCAGTGACGGATATCTTGAGTTAGATCGACCTCCTCGGCGGTCCAGAAGGAGGCTTC 92321
Query 48661 TGCTTTTTTGTACATGCCCCATAT 48684
||||| |||||||| |||| ||
Sbjct 92322 GGCTTTCTTGTACATCTCCCAGAT 92345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927019593448960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |