Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 320 2e-82
seq8546 199 5e-46
seq29420 174 2e-38
seq25216 165 9e-36
seq59 138 1e-27
seq1372 122 1e-22
seq67 120 3e-22
>seq5412
Length=31808
Score = 320 bits (354), Expect = 2e-82
Identities = 488/693 (70%), Gaps = 8/693 (1%)
Strand=Plus/Plus
Query 124294 ATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTC 124353
||| |||||||| | || ||||| ||||| || || ||||| || || || || |||||
Sbjct 14598 ATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTCTCTTC 14657
Query 124354 TTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAG 124413
||||| || | | | ||||| | || || || | ||||| ||||| ||||| |
Sbjct 14658 CTCTTGACCAAGCCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAA 14717
Query 124414 AGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGC 124473
| || || || | |||||||||| | ||||| | || |||| | || ||
Sbjct 14718 ACTCGAGGTTACCAAAGAACCATGCCT------GAATAGGTAGCCGTCGAATACACCAGC 14771
Query 124474 TACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACAT 124533
||| ||| |||||| || || ||||| || ||||| ||||| || ||||| || | |||
Sbjct 14772 TACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCAT 14831
Query 124534 AAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAA 124593
|||||||||||||| || || || || |||||||||| ||| || || | |||||
Sbjct 14832 GAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATTAGAAAAGCTTCCTTAACCAAT 14891
Query 124594 TGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGAT 124653
|||||| | ||||| ||||| |||| | || || |||||||| |||||| ||
Sbjct 14892 TGGGTAGATCAAGAAAACAGCAGTAGCAGTCGCAACAGGGGCTGAATACGCAACAACAAT 14951
Query 124654 CCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCTGAAAT 124713
|||||| ||||| || | | | | |||||||||| | |||||||| | |
Sbjct 14952 CCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTAC 15011
Query 124714 ACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATC 124773
||||| | |||||| |||| | | || ||| ||||||||||| || |||||||||||
Sbjct 15012 ACCAAGTAAGAAGTGAAAAACAATTAGCTCATATGGACCACCATTGTATAACCATTCATC 15071
Query 124774 AACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAAC 124833
||||| ||| |||||||| ||||| || ||||| | || ||||| | | |||
Sbjct 15072 AACAGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCTATAGCAGCAAAAGTCTGAAT 15131
Query 124834 AACTGCACCAGAGATGATGTTGTTACCATATAAGAA-AGAACCCGCTACTGGTTCTCTGA 124892
|| ||||||||||| || ||||| || || ||||| ||| || || ||||| | |
Sbjct 15132 AATGGCACCAGAGATAATATTGTTTCCGTA-AAGAAGAGATCCAAAAACAGGTTCACGAA 15190
Query 124893 TTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCTGCTG 124952
| || || ||||| || ||||| || ||||| || || | || || | || ||| |
Sbjct 15191 TACCATCAATATCTACCGGAGGAGCAGCAATGAAGGCTATAATAAATACGGATGTTGCGG 15250
Query 124953 TGAGTAAGCATGGAATCATTAGAACACCAAACC 124985
| | |||| |||||||| | ||| |||||||
Sbjct 15251 TCAATAAGGTAGGAATCATCAAAACGCCAAACC 15283
>seq8546
Length=31398
Score = 199 bits (220), Expect = 5e-46
Identities = 312/443 (70%), Gaps = 10/443 (2%)
Strand=Plus/Plus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||||||||| ||||||| || ||||| | ||||||||||||||||||||| | |||
Sbjct 12769 GCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 12828
Query 124109 GCTCTGTTTAGAACATCACCCCA-TGTTGGGACGATTTTTCCGTTAGCATCAACAACTGA 124167
|| | ||| | || ||| |||| | | |||| || | | |||||| || ||
Sbjct 12829 GCGCGGTTAATAATATCGGCCCAATAATTACACGA-----CCTTGACTATCAACTACAGA 12883
Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227
|||||| || ||||| || || | | | |||||||| || | ||||| | || || ||
Sbjct 12884 TTGGTTGAAATTGAAGCCGTTTAGGATAAATGCCATAGTACTAATACCTAAAGTAGTAAA 12943
Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTG--AAGACTTCTTGAGTTGTTG 124285
||||| || ||| ||||| || | ||| |||||| || |||| | || | ||||
Sbjct 12944 CCATATACCTACTACAGGCCAAGCAACTAAGAAGAAATGTAAAGAATGA--GAATCGTTG 13001
Query 124286 AATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTAT 124345
|| |||||| |||||||| | || ||||| ||||| || || ||||| || || |
Sbjct 13002 AAACTAGCATATTGGAAGATGAATCGGCCAAAATAACCATGAGCAGCTACAATATTCTTA 13061
Query 124346 GTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCT 124405
||||| || ||||| || || | ||||| | || || | | ||||| |||||
Sbjct 13062 GTTTCCTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTTATTTTCTGTGGTTTCC 13121
Query 124406 CTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAAC 124465
||||| | | ||| || || | |||||||||||| | ||||| || || |||||
Sbjct 13122 CTGATCAAACTAGAGGTTACCAAAGAACCATGCATAACACTGAATATGGAGCCGCCGAAT 13181
Query 124466 ATTCCTGCTACTCCTGCCATGTG 124488
| || ||||| ||| ||||||
Sbjct 13182 ACACCAGCTACGCCTAACATGTG 13204
>seq29420
Length=7120
Score = 174 bits (192), Expect = 2e-38
Identities = 256/360 (71%), Gaps = 2/360 (1%)
Strand=Plus/Minus
Query 124559 AGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAAT 124618
|| |||||||||||||| || || ||||||| |||||| | ||||| | ||
Sbjct 3774 AGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAATAGTAGTA 3715
Query 124619 GCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTAT 124678
||||| | || || ||||||| |||||| |||||||| ||||| || | | | |
Sbjct 3714 GCAGCCGCAACAGGAACTGAATACGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAA 3655
Query 124679 GATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACC 124738
|||||||||| | |||||||| | | ||||| | |||||| ||||
Sbjct 3654 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGCAAAACATTT 3595
Query 124739 AACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGG 124798
| || ||||||||||||||| || |||||||||||||||| ||| |||||||| |||||
Sbjct 3594 AGCTCATAAGGACCACCATTGTATAACCATTCATCAACAGATGCAGCTTCCCATATTGGA 3535
Query 124799 TAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTA 124858
|| ||||| | || ||||| || | |||| || |||||||||| || |||||
Sbjct 3534 TAAAAGTGCAAACCTATAGCAGCAGAAGTCGGAATAATGTCACCAGAGATAATATTGTTT 3475
Query 124859 CCATATAAGAA-AGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGC 124917
|| | ||||| ||| || | || ||||| | || || || ||||| || ||||| ||
Sbjct 3474 CCGT-GAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGAGC 3416
>seq25216
Length=8180
Score = 165 bits (182), Expect = 9e-36
Identities = 203/276 (74%), Gaps = 1/276 (0%)
Strand=Plus/Plus
Query 124396 TGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGA 124455
||| ||||| ||||| | | || || || | |||||||||||| || ||||| ||
Sbjct 6982 TGTGGTTTC-CTGATCAAACTCGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGA 7040
Query 124456 TCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTC 124515
|| ||||| | || |||| ||| |||||| || || ||||| || ||||| |||||
Sbjct 7041 GCCGCCGAATACACCATCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTC 7100
Query 124516 TGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGA 124575
| ||||| || | ||| |||||||||||||| || || || || ||||||||||||||
Sbjct 7101 AGACTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGA 7160
Query 124576 GAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGC 124635
|| || ||||||| |||||| | ||||| ||||| ||||| | || || ||
Sbjct 7161 AAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCCGCAACAGGAGC 7220
Query 124636 TGAATAAGCAACACAGATCCAAGGACGCATTCCTAA 124671
|||||| |||| | |||||||| ||||| || ||
Sbjct 7221 TGAATACGCAATAGCAATCCAAGGGCGCATACCAAA 7256
>seq59
Length=339703
Score = 138 bits (152), Expect = 1e-27
Identities = 186/259 (72%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 124320 AACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGT 124379
|||| || | ||||| || || || || ||||| ||||| || ||| | ||||| | |
Sbjct 52567 AACCATGAGTAGCTACAATATTATAAGTCTCTTCCTCTTGACCAAACCTGTAACCTTCAT 52508
Query 124380 TCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCA 124439
| || || | ||||| ||||| || || | | || || || | |||||||||||
Sbjct 52507 TAGTAGATTCATTTTCTGTGGTTTCCCTAATCAAACTCGAGGTTACCAAAGAACCATGCA 52448
Query 124440 TTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCA 124499
| | ||||| || || ||||| | || ||||| | | |||||| || || ||||
Sbjct 52447 TAACACTGAATAGGGAGCCGCCGAATACACCAGCTACGCTTAACATGTGAAATGGGTGCA 52388
Query 124500 TTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAA 124559
| || ||||| ||||| || ||||| || | ||| |||||||||||||| || | || |
Sbjct 52387 TAAGGATGTTGTGCTCAGCATGGAATACAATCATGAAGTTGAAAGTACCAGAAACTCCTA 52328
Query 124560 GTGGCATACCATCAGAGAA 124578
| |||||||||||||| ||
Sbjct 52327 GAGGCATACCATCAGAAAA 52309
>seq1372
Length=73576
Score = 122 bits (134), Expect = 1e-22
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||| || ||||| || ||||||| | | ||| || || | || || |||||
Sbjct 58559 CATAGCCTCGGCCGCTGCTGTGCCTTCATCAAGCAAAGAAGCATTAGACATAGGCAATCC 58500
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||||| || || || | ||||| ||||| |||| | |||||||||||||||||| ||
Sbjct 58499 GGTAAGATCCGTAATCATGGTTTGATAATTCAATAGGGATTCCAATCTTCCCTGAGAGAT 58440
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023
||||||||| || |||||||| || ||||||| |||||| ||
Sbjct 58439 CTCAGCTTGGTAAGGAGTGTACTGAGTATACCAACCAGGATTTTC 58395
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 139314 GCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTT 139373
|| || || || |||||||| || || || |||||||| || ||||| ||||| || ||
Sbjct 59101 GCNTGAGCAGTACAGATGTTGCTTGTAGCCTTGTCTCTCCTGATATGTTGCTCCCTTGTC 59042
Query 139374 TGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTC 139431
|| | || | | | ||| | || ||| || |||| ||| || | ||| |
Sbjct 59041 TGCATAGCCATACGTAAAGCATGCTTACCTGACGAATCAACACTAACT--CCAATAATCC 58984
Query 139432 TGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTC 139491
| || || ||| |||||||||| | | || || ||||| || ||||||||||| |
Sbjct 58983 TCCCGGGCATCAACCTCTTATACTCTTGAGAAGTAGCCAAGAAAGCGGCATGAGGACCAC 58924
Query 139492 CGTATCCCATAGGAATACCAAACCTTTG 139519
| || |||||||| | ||||||||| ||
Sbjct 58923 CATACCCCATAGGTACACCAAACCTCTG 58896
>seq67
Length=256564
Score = 120 bits (132), Expect = 3e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||| || ||||| || ||||||| | | ||| || || | || || |||||
Sbjct 184166 CATAGCCTCGGCCGCTGCTGTGCCTTCATCAAGCAAAGAAGCATTCGACATAGGCAATCC 184225
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||||| || || || | ||||| || || |||| | |||||||||||| ||||| ||
Sbjct 184226 AGTAAGATCCGTAATCATGGTTTGATAGTTCAATAGGGATTCCAATCTTCCTTGAGAGAT 184285
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
||||||||| || |||||||| || ||||||| ||||||||| | | || | | |
Sbjct 184286 CTCAGCTTGGTAAGGAGTGTATTGAGTATACCAACCAGGATTCTCCATTATATTCCTCAG 184345
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082
|| ||||| || || ||| |||||| || ||| ||||
Sbjct 184346 AATCACTGGTGGGACAAAGGTATTATAGTAACCCATACCAATAA 184389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576193196176880
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