Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 351 3e-92
seq8546 210 6e-50
seq29420 178 4e-40
seq25216 159 1e-34
seq59 156 1e-33
seq8630 105 2e-18
seq4835 86.0 2e-12
>seq5412
Length=31808
Score = 351 bits (388), Expect = 3e-92
Identities = 495/693 (71%), Gaps = 8/693 (1%)
Strand=Plus/Minus
Query 42335 GGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCT 42393
||||||| || |||||||||| | || | | | || || || |||||| | ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCC-TACCTTATTGACCGCAACATCCGTATTTATTATAGCC 15225
Query 42394 TTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTT 42453
||||||||||| ||||||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 42454 CTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTA 42513
|| || || ||||| || |||||||||||| | | | | | || || || |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573
|| || ||| | || |||||||| | |||| |||||| | |||||||| || ||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGG 42633
||| |||| | || || |||||| | | ||| | | |||| |||| || || |||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 42634 GAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTG 42693
|||||| | ||| || || ||| | || ||||| ||||||| || || ||||||||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 42694 GCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGA 42753
|| | || ||||| || ||| | |||| ||| |||| |||| ||||| ||||
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 42754 ATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAAC 42813
|||||||| || ||||| ||||| |||||||||||| | || ||||||||||| || |||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 42814 ATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTC 42873
|| |||||||| || || || ||| | || || || || ||||| | || | | |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 42874 TCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA 42933
| ||||||| | | || ||||| | | | | ||||| || ||||| |||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 42934 AGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCG 42993
||| | || |||| | | ||||||||||| ||||||||||| || || || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 42994 CATGGTTACTTTGGACGGCTTATCTTCCAATAT 43026
|||||||| ||||| || | ||||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
Score = 86.0 bits (94), Expect = 2e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 43141 AACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATT 43200
|| || |||||||| | ||||||| ||| || ||| || ||||||||||||||||
Sbjct 14594 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATT 14535
Query 43201 TTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCG 43260
| || || | |||||||| | || || ||||| || || ||||| | |||||||||
Sbjct 14534 ATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCCCT 14475
Query 43261 CTTGATCTTGCA 43272
|| || || |||
Sbjct 14474 CTCGACCTAGCA 14463
>seq8546
Length=31398
Score = 210 bits (232), Expect = 6e-50
Identities = 314/441 (71%), Gaps = 6/441 (1%)
Strand=Plus/Minus
Query 42832 CATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGT 42891
|| ||| | || || || || ||||| || || || | ||| | |||||||||| |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 42892 CTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTAC 42951
| || |||||| | | | | ||||| || ||||| || | ||| | || |||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 42952 AAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGG 43011
| || |||||||||||||| ||| | || ||||| || || |||||||| ||||| ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 43012 CTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGC 43070
| |||||||||||||| | |||| || || || ||||| || ||||| | | ||
Sbjct 13024 TTCATCTTCCAATATGC-TAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGC 12966
Query 43071 TTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTT 43130
|||||| || || || || ||||| ||| || | || | ||||||||||| |||| | |
Sbjct 12965 TTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCT 12906
Query 43131 GAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTG 43190
|| || || || || |||||||| | ||||||| ||| || ||| || || |||
Sbjct 12905 AAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAAT---TA-TTG 12850
Query 43191 GGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACA 43250
||| |||||| | || || || |||||||| | || || ||||| || || ||||| ||
Sbjct 12849 GGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 12790
Query 43251 TAACTTCCCGCTTGATCTTGC 43271
|||||||| || || || ||
Sbjct 12789 TAACTTCCATCTAGACCTAGC 12769
>seq29420
Length=7120
Score = 178 bits (196), Expect = 4e-40
Identities = 257/363 (71%), Gaps = 0/363 (0%)
Strand=Plus/Plus
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
|| ||| ||||||||||| |||||||| |||||||||||||| ||||| |||||||| |
Sbjct 3412 TGTTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCA 3471
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
|| ||||| || |||||||||| | | | || | | || || || | || ||
Sbjct 3472 CGGAAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTT 3531
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
||| | || |||||||| | |||| |||||| | |||||||| || |||||| |
Sbjct 3532 TTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 3591
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
||| || || |||||| | | ||| | | |||| |||| || || ||||||||
Sbjct 3592 GCTAAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 3651
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698
| | ||| || || ||| | || ||||| |||||| || || | ||||| || ||
Sbjct 3652 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGC 3711
Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758
|| ||| | | ||| | |||| ||| |||| ||||| ||||| ||||| |||||
Sbjct 3712 TGCTACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCC 3771
Query 42759 TCT 42761
|||
Sbjct 3772 TCT 3774
>seq25216
Length=8180
Score = 159 bits (176), Expect = 1e-34
Identities = 187/253 (74%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 42650 TTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAG 42709
|||| ||| | || ||||| | |||| || || || ||||| || || || ||||| |
Sbjct 7255 TTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTG 7196
Query 42710 TCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTT 42769
| ||| | |||| ||| |||| ||||| ||||| ||||| |||||||| || ||||
Sbjct 7195 TTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTT 7136
Query 42770 CCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTT 42829
| ||||| |||||||||||| | || |||||| |||| || ||||| |||||||| || |
Sbjct 7135 CTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCAT 7076
Query 42830 TCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTA 42889
| || ||| | || || | || ||||| || || || | ||| ||||||||||||
Sbjct 7075 TTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 7016
Query 42890 GTCTTGTCACCTC 42902
| | || |||||
Sbjct 7015 CTTTGGTAACCTC 7003
>seq59
Length=339703
Score = 156 bits (172), Expect = 1e-33
Identities = 190/259 (73%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 42742 TTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAG 42801
||||| ||||| |||||||| || |||| ||||| |||||||||||| | || |||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 42802 GCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGT 42861
||||| || ||||| |||||||| || || || ||| | | || || || ||||| ||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 42862 GGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACG 42921
|| || | ||| | |||||||||| | | || ||||| | | | | |||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 42922 ACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAAC 42981
|| ||||| ||| ||| | || |||| ||| ||||||||||| |||||||||||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 42982 ATTGTTGCAGCGCATGGTT 43000
||||| || | |||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq8630
Length=23577
Score = 105 bits (116), Expect = 2e-18
Identities = 109/139 (78%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTT-GCAGCGCATGG 42998
||| | || ||||| || |||||||||||||| ||||| || || || || || |||||
Sbjct 7491 AATGAAGGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGG 7550
Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACT 43057
||| ||||| || | |||||||||||||| | |||| || ||| ||| ||||| || |
Sbjct 7551 TTATTTTGGTCGATTCATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACATT 7609
Query 43058 TCTTTCTTGCCGCTTGGCC 43076
|||| | |||||||||||
Sbjct 7610 TCTTATTAGCCGCTTGGCC 7628
>seq4835
Length=43218
Score = 86.0 bits (94), Expect = 2e-12
Identities = 106/142 (75%), Gaps = 6/142 (4%)
Strand=Plus/Plus
Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999
||| | || |||| || |||||||||||||| ||||| || || || || || ||||||
Sbjct 9053 AATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGT 9112
Query 43000 TACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCT----TTGC 43054
|| ||||| | | |||||||||||||| | |||| || || ||| ||| || |
Sbjct 9113 TATTTTGGCAGATTCATCTTCCAATATGC-TAGTTTCAACAAATCTCGTTCTTTAATTAC 9171
Query 43055 ACTTCTTTCTTGCCGCTTGGCC 43076
| ||||| | |||||||||||
Sbjct 9172 ATTTCTTATTAGCCGCTTGGCC 9193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142872164631512
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