Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq87 134 9e-27
seq9434 127 1e-24
seq4209 107 1e-18
seq10588 100 2e-16
seq184 100 2e-16
seq35801 86.0 4e-12
seq1982 82.4 5e-11
>seq87
Length=177581
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||||||||||||||| | || | ||| ||||
Sbjct 54454 AGGACGAGGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCTGCGAGAGTACGCCCATCT 54513
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| |||| |||||||||| |||| | |||||||| ||
Sbjct 54514 TCGAGTTGCTTACCCGCAAAGATGAGTCTTTGCTGGTCTGGCGGGATACCCTCCTTATCT 54573
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| |||||| ||||| | || | || | ||| || |||| ||||| |||
Sbjct 54574 TGGATTTTTGCCTTGACATTGTCAATGGTGTCTGAGCTCTCAACTTCAAGAGTTATTGTC 54633
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || |||||||| || |||||||| |||||
Sbjct 54634 TTACCAGTGAGGGTTTTCACAAAGATTTGCAT 54665
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| |||| |||| ||| ||||| |||||||| || | ||| | | ||||
Sbjct 54910 AGAACCAAATGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGGGTCCTTCCATCT 54969
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| ||||| ||||||| || ||||||||| | || | |||||||| ||
Sbjct 54970 TCGAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCT 55029
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||||| | || | ||| | ||| || || | || ||||||
Sbjct 55030 TGAATCTTAGCTTTGACGTTGTCAATTGTGTCAGAGCTCTCAACTTCCAACGTAATGGTC 55089
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| ||||| || || || ||||||||
Sbjct 55090 TTTCCCGTAAGGGTTTTGACGAAAATCTGCAT 55121
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | ||| ||||||||| || |||||||| | |||| | | | ||
Sbjct 55594 AGAACCAGGTGGAGTGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCTTCCGTCT 55653
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||| |||||||| | |||||| ||| | || | ||||||||| ||
Sbjct 55654 TCAAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGATCTGGAGGAATCCCCTCCTTATCT 55713
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| ||||| || || || | ||||| ||| | ||||| |||| || ||
Sbjct 55714 TGAATTTTAGCCTTAAC--AT--TGTCGATTGTGTCAGAGCTTTCGACCTCAAGAGTGAT 55769
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || || || || || |||||||||||
Sbjct 55770 GGTCTTACCTGTAAGTGTTTTCACGAAGATCTGCAT 55805
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||| |||||||| || | ||| | | |||| || |||||||| || || |||
Sbjct 55159 TCTTTCTGGATGTTATAATCAGCAAGGGTCCTTCCATCTTCGAGTTGCTTGCCAGCAAAG 55218
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||||||| | || | |||||||| || | || || |||||||
Sbjct 55219 ATCAATCTCTGCTGGTCTGGAGGAATTCCCTCCTTATCTTGAATCTTAGCTTTGACGTTG 55278
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| | ||| || |||| || || ||||| || || | ||||| |||
Sbjct 55279 TCAATGGTGTCAGAGCTCTCAACTTCAAGAGTAATAGTCTTGCCAGTCAAAGTCTTCACA 55338
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 55339 AAGATCTGCAT 55349
>seq9434
Length=50679
Score = 127 bits (140), Expect = 1e-24
Identities = 159/216 (74%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| |||||||||||||||||| || | ||| |||| ||||
Sbjct 44726 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAGAGTGCGGCCATCC 44785
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||||||||||||| || |||||||| || |||||||| | || | ||| ||||||||
Sbjct 44786 TCCAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATCCCTTCCTTGTCC 44845
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| ||||| || || || | ||||| ||| | || || || | ||| ||
Sbjct 44846 TGAATTTTAGCCTTAAC--AT--TGTCGATTGTATCAGAGCTTTCAACCTCCAAGGTGAT 44901
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||||| || | ||||| ||||| || |||||
Sbjct 44902 GGTTTTTCCAGTCAATGTCTTCACAAATATTTGCAT 44937
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| |||||||| |||||||| || | ||| | | ||||
Sbjct 45638 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTATAATCTGCAAGGGTCCTTCCATCT 45697
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| ||||| ||||||| | ||||| ||| | || | |||||||||||
Sbjct 45698 TCAAGTTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCCCTCCTTGTCT 45757
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| |||| || || |||
Sbjct 45758 TGAATCTTAGCTTTGACATTGTCAATTGTGTCTGAGCTCTCGACTTCAAGTGTGATAGTC 45817
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||||||||| || ||||||||
Sbjct 45818 TTGCCAGTTAGGGTCTTTACGAATATCTGCAT 45849
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| |||||||| || || || | ||| | | ||||
Sbjct 45866 AGCACCAAGTGGAGGGTGGACTCTTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCC 45925
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||| ||||| |||| ||| ||||| | || | |||||||||||
Sbjct 45926 TCTAGTTGCTTTCCGGCAAAGATAAGTCTTTGTTGGTCAGGGGGAATTCCCTCCTTGTCT 45985
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||| ||| | || | ||| | || || || | ||| || |||
Sbjct 45986 TGGATCTTAGCTTTTACGTTGTCAATTGTGTCAGAGCTTTCAACCTCGAGGGTGATTGTC 46045
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| || || |||||||||||
Sbjct 46046 TTGCCTGTTAGGGTTTTCACGAAGATCTGCAT 46077
>seq4209
Length=73032
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || ||||||||| ||||||||||| | ||| | | ||||
Sbjct 22 AGAACCAGGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTTCTACCATCC 81
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || || ||||||||| | || | ||| ||||||||
Sbjct 82 TCGAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCT 141
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| |||| | || | ||| || || | ||||||||||
Sbjct 142 TGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCAACCTCTAGGGTTATGGTC 201
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | || || ||||||||||||||
Sbjct 202 TTTCCGGTCAATGTTTTCACAAAGATCTGCAT 233
>seq10588
Length=20159
Score = 100 bits (110), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| |||||||||||| || || || | || | || ||||
Sbjct 1040 AGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTACGGCCATCC 1099
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||||| || || |||||| | || | ||| ||||||||
Sbjct 1100 TCAAGCTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATCCCTTCCTTGTCC 1159
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || |||| || ||| | ||| || || | ||| ||
Sbjct 1160 TGGATCTTAGCCTTCAC--AT--TATCAATAGTATCAGAGCTCTCAACCTCCAAGGTGAT 1215
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || | ||||| ||||||||||||||
Sbjct 1216 GGTCTTGCCAGTCAATGTCTTAACAAAGATCTGCAT 1251
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || || |||| |||| ||||||||| || || || || | |||| | | ||||
Sbjct 1268 AGCACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCTAGGGTTCTTCCATCC 1327
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||| || | |||||||| | || | |||||||||||
Sbjct 1328 TCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1387
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||| || || | ||| || |||
Sbjct 1388 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATAGTC 1447
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| ||||||||||||||
Sbjct 1448 TTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 1479
>seq184
Length=120086
Score = 100 bits (110), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || |||||||| || || || || | ||| | || ||||
Sbjct 5438 AGCACCAGGTGGAGCGTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTTCGGCCATCC 5379
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || |||||||||||| | || | || ||||||||
Sbjct 5378 TCTAGCTGCTTACCGGCGAAGATTAGCCGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCC 5319
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| || || || | ||||| || || ||||| || | ||||||
Sbjct 5318 TGGATCTTTGCCTTCAC--AT--TGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTAT 5263
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || || || ||||||||
Sbjct 5262 CGTCTTACCCGTCAGGGTTTTGACGAAAATCTGCAT 5227
>seq35801
Length=5147
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| |||||||||||||| || || | | | || ||||
Sbjct 341 AGAACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCATCC 282
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||||| | ||||||||| |||| | ||||||||||||
Sbjct 281 TCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCC 222
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| |||| | || | || || || | ||| ||||||
Sbjct 221 TGAATCTTCGCCTTGACATTATCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATGGTC 162
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || || ||||||||
Sbjct 161 TTCCCTGTCAAAGTCTTGACGAATATCTGCAT 130
>seq1982
Length=56187
Score = 82.4 bits (90), Expect = 5e-11
Identities = 115/159 (72%), Gaps = 8/159 (5%)
Strand=Plus/Minus
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| ||||||||||| ||||| |||||||| | || | |||||||||
Sbjct 32273 TCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTTG 32214
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || || || || || | ||||| || || ||| || || | |||
Sbjct 32213 TCCTGGATCTTGGCCTTCAC--AT--TGTCGATGGTGTCGGAGGACTCAACCTCGAGGGT 32158
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||||| ||||| ||||| || || |||||||||||
Sbjct 32157 TATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 32119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324154291740686
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