Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 342 6e-89
seq25216 178 2e-39
seq8546 174 2e-38
seq29420 161 1e-34
seq59 156 5e-33
seq3927 131 2e-25
seq2610 129 7e-25
seq8630 104 3e-17
seq56071 89.7 6e-13
seq4835 82.4 9e-11
>seq5412
Length=31808
Score = 342 bits (378), Expect = 6e-89
Identities = 495/694 (71%), Gaps = 10/694 (1%)
Strand=Plus/Minus
Query 177604 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCC 177662
|||| ||||| |||||||||| || | ||| | ||||| ||| | || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 177663 TTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 177722
||| | |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 177723 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTT 177782
| || || ||||| || ||||||||||| || | | ||| || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 177783 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 177842
||||| ||||| || |||||||| ||||| ||||||| ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 177843 TTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGG 177902
| | || | || ||||||||| | | || | | || ||||| |||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 177903 GAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTT 177962
|||||| | |||||| ||||||||||| ||||| |||||| || || || ||||||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 177963 GCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGC 178021
|| | || | || || ||||| | |||| || | ||| |||| || || |||
Sbjct 14924 GCGACTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGG 14866
Query 178022 TATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAA 178081
||||||||| || || ||||||||||| |||| |||| |||||||||| || || |||||
Sbjct 14865 TATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAA 14806
Query 178082 TATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTT 178141
|||||||||||||| || |||||| | || || ||||| ||||||| || | || ||
Sbjct 14805 CATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATT 14746
Query 178142 CTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGA 178201
| | |||||| | | || || || | || | || || ||||||| |||
Sbjct 14745 C------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGA 14692
Query 178202 GTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGC 178261
|| || | ||||||| | | || ||||| ||||| || ||||| ||||| || ||
Sbjct 14691 ATCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGC 14632
Query 178262 CCATGGTTACTTCGGTCGTTTGATCTTCCAATAT 178295
|||||||| || || || || ||||||||||||
Sbjct 14631 TCATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
>seq25216
Length=8180
Score = 178 bits (196), Expect = 2e-39
Identities = 183/237 (77%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 177921 GGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTC 177980
||||||||||| ||||| | |||| || || || |||||||| || || | || ||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGT- 7195
Query 177981 TTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTC 178039
||||| | |||| || | |||||||| || || |||| ||||||||| || || ||
Sbjct 7194 TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTC 7135
Query 178040 TGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTT 178099
||||||||| |||| |||| |||||||||| | || ||||| |||||||||||||| ||
Sbjct 7134 TGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATT 7075
Query 178100 CCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156
|||||| | || || | ||| |||||||| || || || ||| ||||||||||||
Sbjct 7074 TCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 7018
>seq8546
Length=31398
Score = 174 bits (192), Expect = 2e-38
Identities = 306/444 (69%), Gaps = 5/444 (1%)
Strand=Plus/Minus
Query 178101 CACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT 178160
|||||| | || || ||||| |||||||| || || | ||| || ||||||||| |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 178161 CTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTAC 178220
| || || ||| | || | || || ||||||| | | ||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 178221 AAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGT 178280
| || || ||||| || ||||| | || || || || || |||||||| || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 178281 TTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCA 178340
|| |||||||||||||| |||||| | || | ||| | || |||||| | | ||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 178341 TGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTC 178400
||||||||||| || || ||||| || | | ||| | || |||||||||| |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 178401 AATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGG 178460
|| || ||||| |||||||| || | | || | ||||| ||||| || |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 178461 GCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACA 178520
|| || | | ||||| || || || |||||||| ||||| ||| | ||| || ||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCA 12790
Query 178521 TAACTTCCCGCTTGATCTTGCAGC 178544
|||||||| || || || || ||
Sbjct 12789 TAACTTCCATCTAGACCTAGCTGC 12766
>seq29420
Length=7120
Score = 161 bits (178), Expect = 1e-34
Identities = 254/361 (70%), Gaps = 2/361 (1%)
Strand=Plus/Plus
Query 177671 TGCTCCCCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGG 177730
|||||| || || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 177731 TAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTA 177790
||||| || |||||||||| || | || |||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 177791 TCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACT 177850
||| || |||||||| ||||| ||||||| ||| | || || |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 177851 CGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTC 177910
|| || |||||| | | || | | || ||||| |||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 177911 ATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGC 177970
| |||||| ||||||||||| ||||| |||||| || || | |||||||| || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 177971 ATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTC 178029
| | | ||||| | |||| || | |||||||| || || |||| ||||||||
Sbjct 3715 TACTACTAT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTC 3773
Query 178030 T 178030
|
Sbjct 3774 T 3774
>seq59
Length=339703
Score = 156 bits (172), Expect = 5e-33
Identities = 190/259 (73%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 178011 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAA 178070
|| || |||| ||||||||| || | ||||||||||| |||| |||| ||||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 178071 GCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGT 178130
|| || ||||| |||||||||||||| || |||||| | | || ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 178131 GGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACG 178190
|| || || ||| || ||||||||| | | || || || | | | || ||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 178191 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAAC 178250
||||||| ||| || || | ||||||| ||| || ||||| ||||| || |||||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 178251 ATCGTCGCAGCCCATGGTT 178269
|| || || | |||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq3927
Length=49767
Score = 131 bits (144), Expect = 2e-25
Identities = 180/248 (73%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 179226 ATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTT 179285
||||| ||| || |||||||| || || || | ||||| || || ||| | ||||| ||
Sbjct 26006 ATGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATT 26065
Query 179286 TGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTA 179344
|||||| || || ||| || | | || ||||| ||||| || || || |||||| |
Sbjct 26066 TGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTATTTGGTCCAA 26124
Query 179345 TTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTG 179404
||||| | || ||| || ||||| || || ||||| || || || ||||||||||||
Sbjct 26125 TTGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTG 26184
Query 179405 CGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACA 179464
|||| |||||||| || | || || ||||| | || || || ||||| || || |
Sbjct 26185 CGCCTAGTTTTGGTGTAGCATCTAT-ATTCGATTCATCCTCTTTTTTCAAGGGTTTCATA 26243
Query 179465 ACTGGACA 179472
| ||||||
Sbjct 26244 ATTGGACA 26251
>seq2610
Length=55653
Score = 129 bits (142), Expect = 7e-25
Identities = 171/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 138527 CTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCT 138586
|||||||| |||||| | || | ||||| | || || | |||||||| ||||| |
Sbjct 39267 CTGATGATGTATACATCTTGGACTCAGCTGAGAATGCTGGCTTGGATCTTCCATACTCGT 39326
Query 138587 GTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGT 138646
| || |||||||| ||||| ||||||||||| || | || ||| | || || ||||
Sbjct 39327 GCCGAGCTGGTGCTTGTTCAACCTGTGCTGGGAAGCTGATTTCTGGATCAGTCGACCAGT 39386
Query 138647 CTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCA-GGATTTATCATGACTTGCGTA 138705
| ||| ||| ||||||||||||||||||||| | || || | | ||||||||||
Sbjct 39387 CAGACGGGTCCTTCCTTGATGATGACCAAATT-AATCAGGGCTACGTACTGACTTGCGTC 39445
Query 138706 GCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACT 138760
|| ||||| || |||||| | ||| | ||| | ||||| | ||||| ||||
Sbjct 39446 GCGTACCCTACCGGAGATTGTGTGATTCATACTCACAAAGAAGGTGAACTCTACT 39500
Score = 89.7 bits (98), Expect = 6e-13
Identities = 163/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588
||||| ||||||||||||||| || || ||||| ||| | |||||||| || || ||
Sbjct 41006 GATGACATGTACATCCTTGATGCAGCCGAGGAAGCGGGTTTGGATCTTCCGTATTCGTGC 41065
Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648
| ||||| |||| ||||| |||||||| | | ||| || | || ||||||||
Sbjct 41066 AGGGCTGGATCATGCTCTACTTGTGCTGGGATCATGGTTTCGGGTTCAGTTGATCAGTCA 41125
Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATT-TATCATGACTTGCGTAGC 138707
|| || || |||||||| || || | || || ||| || || |||| || || |
Sbjct 41126 GATGGCTCGTTTCTTGATGAGGAACAGA-TGGAGAAGGGTTACCTCCTGACCTGTGTTTC 41184
Query 138708 ATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGAT 138763
| || || || |||||| | || | || | || || || | ||| | |||||
Sbjct 41185 GAAGCCAACCTCGGATTGTGTCATCCATACCCATAAGGAAGAGGCACTCTTCTGAT 41240
>seq8630
Length=23577
Score = 104 bits (114), Expect = 3e-17
Identities = 118/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 178191 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAAC 178250
||| ||| ||| ||| || | |||||||| || || ||||| || ||||| || ||
Sbjct 7473 ACATAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAAT 7532
Query 178251 ATCGT-CGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAA 178309
||||| ||| || |||||||| || ||||| || |||||||||||||| ||||||||
Sbjct 7533 ATCGTACGCTGCTCATGGTTATTTTGGTCGATTCATCTTCCAATATGCTAGTTTCAACAA 7592
Query 178310 CTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCT 178346
|| ||||| | || ||||| | || || ||||||
Sbjct 7593 TTCTCGTTCTTTACATTTCTTATTAGCCGCTTGGCCT 7629
>seq56071
Length=1723
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138537 GTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGG 138596
||||||||||||||| || || ||||| ||| | |||||||| || || || | |||||
Sbjct 1721 GTACATCCTTGATGCAGCCGAGGAAGCGGGTTTGGATCTTCCGTATTCGTGCAGGGCTGG 1662
Query 138597 TGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTC 138656
|||| || || |||||||| | | ||| || | || |||||||| || ||
Sbjct 1661 ATCATGCTCCACTTGTGCTGGGATCATGGTTTCGGGTTCAGTTGATCAGTCAGATGGCTC 1602
Query 138657 TTTCCTTGATGATGACCAAATTGCAGCAGGATT-TATCATGACTTGCGTAGCATACCCCA 138715
|| |||||||| || || | || || ||| || | || |||| || || | | || |
Sbjct 1601 GTTTCTTGATGAGGAACAGA-TGGAGAAGGGTTATCTCCTGACCTGTGTTTCGAAGCCAA 1543
Query 138716 CATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGAT 138763
| || |||||| | || | || | || || || | ||| | |||||
Sbjct 1542 CCTCGGATTGTGTCATCCATACCCATAAGGAAGAGGCACTCTTCTGAT 1495
>seq4835
Length=43218
Score = 82.4 bits (90), Expect = 9e-11
Identities = 100/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 178215 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTC 178274
||||||| || || ||||| || ||||| || || ||||| || || |||||||| ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 178275 GGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTC----ACTGCACTTCTT 178330
|| | || |||||||||||||| |||||||| || ||||| | | || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 178331 CCTCGCAGCATGGCCT 178346
| || || ||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602732787841040
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