Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq13 194 1e-43
seq204 163 2e-34
seq39944 150 1e-30
seq73720 140 2e-27
seq213 131 1e-24
seq1540 123 2e-22
seq8949 114 1e-19
seq379 114 1e-19
seq8324 109 4e-18
seq28989 104 2e-16
seq6391 98.7 7e-15
seq51814 95.1 9e-14
seq9121 95.1 9e-14
seq113 93.3 3e-13
seq12197 91.5 1e-12
seq43983 89.7 4e-12
seq6020 87.8 1e-11
>seq13
Length=452113
Score = 194 bits (214), Expect = 1e-43
Identities = 692/1062 (65%), Gaps = 40/1062 (4%)
Strand=Plus/Minus
Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483
|||||| |||||| | ||||| |||||||| | || || ||| || ||||| |
Sbjct 245334 CGGCAGACACATTCAAGATACCGTTGGCATCAATGTCGAAACAGACAGTGATCTGAGGAA 245275
Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543
| || | ||||||| ||||| || ||| | ||| | || || || || || |
Sbjct 245274 CACCACGGGGAGCAGGCGGGATTCCAGACAACTCGAATTTACCTAGCAAGTTGTTGTCCT 245215
Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603
| || | || || || || ||| ||||| || | | || || ||||| |
Sbjct 245214 TGGTCCTTGCTCTCTCTCCTTCATAAACCTGGATCAACACACCGGGCTGGTTGTCTGAGT 245155
Query 281604 AAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATA 281659
|||||| || ||| ||| || || || || |||||||| ||||| | |
Sbjct 245154 AAGTTGAGAAAACTTGCTCTTTCTTTGTCGGGATGGTGGTGTTTCTCGGGATCAAGACT- 245096
Query 281660 TTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGG 281719
||||| | ||| ||||| || || | ||| | ||| || ||||| ||||| | |||
Sbjct 245095 ---GTCATGACACCGCCAGCAGTCTCAAGACCCAAAGAGAGTGGAGTAACATCCAATAGA 245039
Query 281720 ACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGC 281778
| | | || | || |||| | | || ||||| | || ||||||| ||| ||
Sbjct 245038 AGCAAGTCCTGCACCTTCTCATTACCCTCGCCGCTCAAGATT-GCAGCTTGAACAGCCGC 244980
Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838
|||||| |||||||| || || ||||| | | | | || | || || || |||||
Sbjct 244979 ACCATAAGCAACAGCCTCGTCGGGATTGATACTCTTGCAAAGCTCCTTTCCGTTAAAAAA 244920
Query 281839 ATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 281897
| || || || ||| || || ||||| | || || || ||||| | |||| |
Sbjct 244919 GTCCTGCAACAA-TTGCTGAACTTTCGGAATTCTAGTGGAACCACCAACAAGAACAACAT 244861
Query 281898 CATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 281956
|||| || | | | || |||| || | |||| ||| || ||||| || || | |
Sbjct 244860 CATGGACA-GAGCTCTTGTCCATCTTAGCATCCCTCAAACACTTCTCAACTGGCTCCATA 244802
Query 281957 CCAGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014
| ||| ||||| || || ||| ||||||||| ||| | |||| | ||
Sbjct 244801 CACTTTCTGAACAAATCCATGTTCAA--TTCTTCGAAACGAGCACGGGTAATGGA-ACTG 244745
Query 282015 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAA 282070
|| || |||| ||||| |||| ||||||| ||||| || ||||| ||| || ||
Sbjct 244744 TAGAAATCAACACCTTCATACAATGAATCAATCTCAATTGTGGTTTGTGCAGTGGATGA- 244686
Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGA 282129
|| ||| | | || || | |||||| || || || | ||| | |||| ||| | |
Sbjct 244685 GAGAGTTCTCTTT--GCTCTTTCACAGGCAGTTCTCAATCTCC-TAAGAGCTCTAGGGTT 244629
Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 282189
| | | || | || | || ||||| || || | |||| | | || | |
Sbjct 244628 TCCGGTAATGTCCTTCTTGTTCTTCCTCTTAAACTCCTGAACAAAGTGATTAACCATTCT 244569
Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249
|| |||||||||||||||||||| | || | || | ||||| | |||| ||| |
Sbjct 244568 GTTGTCAAAATCTTCACCTCCCAAATGGGTGTCACCAGCTGTAGCCTTGACTTCGAATAT 244509
Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309
|| ||||||| || | ||||| ||||| || || || || | |||||| || |
Sbjct 244508 ACCCTCTTCAATAGTGAGAAGAGAGACATCGAAAGTACCGCCTCCAAGATCAAAGATCAA 244449
Query 282310 TACATTCATTTCT-------TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGC 282360
|||||| | || |||| || || |||||||||||||| |||| ||||||
Sbjct 244448 GACATTCTTCTCACCAACACTTGT---GGCCTTCTTATCAAGACCATAAGCAATAGCAGC 244392
Query 282361 AGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 282420
||| ||||| ||||||||||| | || ||||| || |||||||| || ||||| ||
Sbjct 244391 AGCTGTTGGCTCATTAATAATACGCATGACATTGAGTCCAGCAATGACACCGGCATCCTT 244332
Query 282421 AGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
|| ||||| | || || || || || || ||||| |||||
Sbjct 244331 GGTTGCTTGACGCTGAGAGTCATTGAAGTAAGCAGGGACAGT 244290
>seq204
Length=216821
Score = 163 bits (180), Expect = 2e-34
Identities = 586/901 (65%), Gaps = 29/901 (3%)
Strand=Plus/Minus
Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTC 281648
||||||||| ||||| || | || || ||| || ||| || || || |||||||
Sbjct 36947 TTGATTATCCGAATACGTCGAGAAGAC-CTGCTCCTTCTTAGTCGGGATCGTCGTGTTTC 36889
Query 281649 T----ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGA 281704
| ||||| | |||||| | |||||||| || || ||||| | | | ||
Sbjct 36888 TCGGGATCAACAC----GGTCATCACGCCACCAGCCGTCTCCAAACCCAAACTCAACGGC 36833
Query 281705 GTGACATC-AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 281763
|| || || ||| | |||| | ||||| || ||||| | || |||||| ||
Sbjct 36832 GTCACGTCCAACAACAACAAC-TCTTGAACCTTCTCATCTCCCTCGCCCGTAAGAATCGC 36774
Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823
|| |||| || || ||||| || || || ||||| ||||| | | | | | | |
Sbjct 36773 CGCCTGAACCGCCGCGCCATACGCCACCGCCTCATCGGGATTTATACTCTTACACAACTC 36714
Query 281824 TTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 281882
|| ||||||||||||| ||| |||| |||| | ||| ||||| | | ||| || |
Sbjct 36713 CTTCCCATTGAAAAAATCTTGCAAGA-GTTGCTGAATCTTTGGAATTCTCGTTGACCCAC 36655
Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942
|||| || |||| |||| || || ||||||| |||| |||| || ||| |
Sbjct 36654 CAACCAAAACAACCTCATCAACTTGACTCTTATCCATCTTTGCATCCCTCAAGCATTTCT 36595
Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002
| || || || | || ||||||||||| | | || || || |||| ||||
Sbjct 36594 CCACCGGCTCCATACACTTCCTAAACAAGTCCATATTCAACTCCTCAAACCTAGCCCTAG 36535
Query 282003 TAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA 282061
|||||| | | || || ||||| || |||||||| || |||| || ||||| || ||
Sbjct 36534 TAAGAG-GCGAGTAAAAGTCAATCCCCTCGAACAACGAGTCAATCTCGATCGTCGTCTGC 36476
Query 282062 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 282121
| || || || | || || |||||||| || ||||| |||| || | |||||| ||
Sbjct 36475 GAGGACGACGACAAAGCTCGCTTAGCACGCTCGCATGCGGTCCGAAGCCGTCGTAACGC- 36417
Query 282122 TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG-- 282179
|| ||| ||| | ||| ||| | ||| || || | |||| |||
Sbjct 36416 -CCGCGCATTCCCGGAAAGATCTTTCTTATGCTTCCTTCTAAACTCCGACACGAAATGGT 36358
Query 282180 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 282239
| || | ||||| || ||||| || ||||| | | |||| || | ||| || | |
Sbjct 36357 TCACCATTCGATTGTCGAAATCCTCGCCTCCAAGATGCGTATCGCCCGCCGTCGCCTTAA 36298
Query 282240 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299
| | ||| | ||| ||||| | || || | || || || || || || || | |
Sbjct 36297 CCTCGAAGATTCCTTCTTCGATAGTTAAGATAGACACGTCGAAAGTGCCGCCCCCGAGGT 36238
Query 282300 CAAAAATAAGTACATT-CATT---TCTTTGTCTTGG-----TTTTTATCAAGACCATACG 282350
| || ||||| || || | | | ||||| || || || || ||||||||||
Sbjct 36237 CGAATATAAGGACGTTACGCTCCCCCGTTGTCCGGGCGGCCTTCTTGTCGAGACCATACG 36178
Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410
||| || || || || || || ||||| || | | || || || ||||||| |
Sbjct 36177 CAATGGCGGCGGCCGTCGGCTCGTTAATGATCCGGATGACGTTGAGGGCAGCAATCGAGC 36118
Query 282411 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 282470
| || ||||| |||||||| | ||| || ||||| || || || || || || | ||||
Sbjct 36117 CGGCGTCTTTGGTGGCTTGGCGTTGGGAGTCGTTGAAGTAGGCGGGGACGGTTACGACGG 36058
Query 282471 C 282471
|
Sbjct 36057 C 36057
>seq39944
Length=4033
Score = 150 bits (166), Expect = 1e-30
Identities = 326/478 (68%), Gaps = 10/478 (2%)
Strand=Plus/Plus
Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491
||||| ||||| || ||||| || | || || ||| ||||| || || || |
Sbjct 778 ACATTGAGAATGCCGTTGGCGTCAATGTCGAAGCAGACCGTGATTTGCGGAACGCCCCGA 837
Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551
|||| |||||||| || | | || | ||||| ||||| ||||| || |
Sbjct 838 GGAGCTGGTGGGATTCCAGAGAGCTCGAACTTGCCCAGTAAGTTATTGTCTTTTGTTCTT 897
Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611
||||||||| || ||| |||||| || ||| || ||||| || |||||||
Sbjct 898 GCTCGTTCACCTTCATAAACTTGGATTAGCACACCAGGCTGGTTATCGGAGTAAGTTGAG 957
Query 281612 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670
||||| ||| ||| || ||||| || || |||||||| ||| | ||||||| |
Sbjct 958 AATAC-CTGCTCTTTCTTGCAAGGGATAGTAGTGTTTCTCGGAATCAAGGTGGTCATTAC 1016
Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730
||||| || || || ||||| || || ||||||||||| || | | | || || ||
Sbjct 1017 TCCACCCGCCGTCTCCAAACCGAGCGATAGAGGAGTGACGTCCAGCAACAGAAGATCCTG 1076
Query 281731 AAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789
|| || | || | | ||| |||| ||||| || || | |||||||||||||| |
Sbjct 1077 AACCTTCTGATTACCCTCGCCACTCAAG-ATAGCAGCCTGGACTGCAGCACCATATGCTA 1135
Query 281790 CAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAA 281846
|||||||||| || || | | || || || | ||| |||||||| || | ||| ||
Sbjct 1136 CAGCTTCATCCGGGTTGATGCTCTTGCA--TAACTCTTTCCCATTGAAGAAGTCTTGCAA 1193
Query 281847 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904
||| ||| || || ||||| || | ||| || ||||| || ||||| ||||| ||
Sbjct 1194 -AAGCTGTTGAACTTTTGGAATCCGGGTTGAGCCACCAACCAACACAATATCATGGAC 1250
>seq73720
Length=1174
Score = 140 bits (154), Expect = 2e-27
Identities = 293/432 (68%), Gaps = 11/432 (3%)
Strand=Plus/Plus
Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT-- 282326
|||| |||||| |||||||| |||| |||||| || | |||||| | || |
Sbjct 40 AGAGAAACATCGAATGTTCCACCGCCCAAATCAAAGATCAACACATTCTTCTCCCCGGTA 99
Query 282327 ---CTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382
|||| || || |||||||| || |||| ||||||||||||||||||||||| |||
Sbjct 100 CTGCTTGCCTTCTTGTCAAGACCGTATGCAATGGCAGCAGCAGTTGGTTCATTAATGATT 159
Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442
|||| ||||| | |||| |||| || ||||| || ||||| |||| || || ||
Sbjct 160 CTCATGACATTCATTCCAGAAATTACCCCAGCATCCTTGGTGGCCTGTCGCTGAGAGTCA 219
Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502
|| ||||| ||||| || |||| ||| |||| | ||| | | |||| | |||| |
Sbjct 220 TTGAAATAAGCAGGGACTGTAACAACAGCATTCTTCACTGTTGTACCAAGAAAAGCCTCT 279
Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTG 282562
|| ||| ||||| || | | | ||| |||||||| | ||| | |||||||
Sbjct 280 GCAATTTCCTTCATCTTGGTGAGTACCATGGATGAAATCTCTTCAGCGCTGAATTGCTTC 339
Query 282563 GATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACC---AACATTAATAACTTT 282618
|| |||| ||| || ||| || || | ||| | || ||| |||||
Sbjct 340 TCCTCGCCCTTGA-ATGTCACAACAATCATCGGCTTGTCACCGGGACCAGGAATCACTTT 398
Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 282678
||||||||||| |||||| || || || | ||| |||| || ||||| ||
Sbjct 399 AAATGGCCAATGTTTCATGTCACTCTGTACCGACGGATCACTAAACCTCCTTCCAATCAA 458
Query 282679 TCGTTTTGCATC 282690
|| ||||||||
Sbjct 459 TCTCTTTGCATC 470
>seq213
Length=112984
Score = 131 bits (144), Expect = 1e-24
Identities = 471/727 (65%), Gaps = 20/727 (3%)
Strand=Plus/Plus
Query 281758 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 281817
|||||| |||| ||| |||||||||||||| ||||||||||| || |||| |||
Sbjct 48580 AATAGCAGCTTCAATTGCAGCACCATATGCCACAGCTTCATCTGGGTTAATGCTTTTGCA 48639
Query 281818 TAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATG 281876
|| | || ||| |||||||| ||| || |||||| |||||| |||| | ||| |
Sbjct 48640 AAGCTCCTTGCCACAGAAAAAATCTTGCAA-AAGTTGCTGCACCTTAAGAATCCTAGAGG 48698
Query 281877 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA- 281935
| || ||||| | || | |||| | || |||| |||| |||| |||
Sbjct 48699 AACCACCAACAAGAACTACATCATCGATAACACTCTTGTCCATCTTTGCATCCCTCAAAC 48758
Query 281936 ACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAG-TCTGAACAAAGTTCTTCGAATTT 281994
| | || | || |||| || || | || || |||| || | ||||| || |
Sbjct 48759 AAATCTTAATAGGCTTCACA--CATCTTTCAAAGAGATCTGTACTCATCTCTTCAAACAT 48816
Query 281995 AGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGT 282054
||| ||||| ||| | |||| || || || || ||| | |||| ||||| ||
Sbjct 48817 AGCATGAGTAACAGTAGTGCAAAAATCTATGCCCTCAAAGAAACAGTCAATCTCAATGGT 48876
Query 282055 AGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCG 282114
||||| ||| | ||| || || | || || || ||||| || || | | || |
Sbjct 48877 AGTTTCAGTAGTAGATGAGAGAGTTCGCTTTGCTATCTCACAAGCAGTTTTCAACCTGCT 48936
Query 282115 TAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACA 282172
| || ||| | || ||| | ||| |||| | || || || || || ||||
Sbjct 48937 AATAGCCCTTG--GGTTCCCATTGATATCCTTTTTGTGCTTACTTTTAAATTCCCTAACA 48994
Query 282173 CACCATGTTACAAGA--CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230
|| ||| | || | | || |||||| || || ||||| || | ||||| ||| | |
Sbjct 48995 CA--ATGATTCACCATTCTATAATCAAATTCCTCCCCTCCAAAGTGAGTATCTCCAGCTG 49052
Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290
| ||| | || | | | |||| || | | | || ||||||| | || || |
Sbjct 49053 TTGCTATAACATCATAGATACCATTATCCATTTTGAGTACAGAAACATCAAGCGTGCCGC 49112
Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATCAAGAC 282344
|||| || | ||| || | |||||| | || || ||| | |||| |||||
Sbjct 49113 CACCAATGTGAAATATCAAGACATTCCTCTCAACAGAATTACTTTGCATCTTATTAAGAC 49172
Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404
|||| | |||||||||||| | | || |||| || | || | ||| || || ||||
Sbjct 49173 CATAAGACAAAGCAGCAGCACTAGACTCGTTAAGGATACGCACGATATTCAGTCCTGCAA 49232
Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464
| | |||||||| || |||||||| | || ||| | || |||| ||||| ||||| |
Sbjct 49233 TAATGCCTGCATCCTTTGTGGCTTGGCGCTGAGAACCATTGAAATGAGCAGGTACAGTCA 49292
Query 282465 TAACGGC 282471
||| ||
Sbjct 49293 CAACAGC 49299
>seq1540
Length=57101
Score = 123 bits (136), Expect = 2e-22
Identities = 160/220 (73%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| | || ||||| ||||| |||||||||||||||||| ||||| || || |||
Sbjct 19086 CCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCTGCA 19145
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||||| || || || || || ||||| ||||||| ||| || || ||||| |||||||||
Sbjct 19146 ATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACAGTA 19205
Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523
|| ||||| | | || ||||||| ||||| || |||| ||||| ||| |
Sbjct 19206 ATGACGGCTTTGGAAACAGACTTTCCAAGGTAAGCCTCGGCAGTTTCCTTCATCTTAGTC 19265
Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563
|| || | | |||||| || |||||||| ||||
Sbjct 19266 AAGATATAAGCTCCAATTTGGCTAGGTGAATATTG-TTGG 19304
Score = 93.3 bits (102), Expect = 3e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175
|| || || | ||| || |||||||| ||||||||||| ||| | ||||||| | ||
Sbjct 19083 AATCCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCT 19142
Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235
|||||| | | | || |||||||| || ||||| ||||| || |||||||| |||
Sbjct 19143 GCAATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACA 19202
Query 86236 GTAATAACTGCTTT 86249
||||| || |||||
Sbjct 19203 GTAATGACGGCTTT 19216
>seq8949
Length=22983
Score = 114 bits (126), Expect = 1e-19
Identities = 157/218 (72%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT--TTG 282325
||||| ||||| || ||||| || | |||||| || || || ||| | ||| |
Sbjct 20350 AAGAGAGACATCGAATGTACCACCTCCAAGATCAAAGATCAGCACGTTCTTCTCTCCTAC 20409
Query 282326 TCTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381
|||| ||||| ||||| ||||| |||| ||| ||||| || |||||||| || ||
Sbjct 20410 ACTTGTGGCTTTTTTGTCAAGCCCATAAGCAATAGCGGCAGCTGTGGGTTCATTGATGAT 20469
Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441
| || ||||||||||||||||| || |||||||| || ||||| | ||| || ||
Sbjct 20470 ACGCATGACATTAAGACCAGCAATGACACCAGCATCTTTGGTAGCTTGACGTTGGGAGTC 20529
Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479
||||| || ||||| || || | ||| || | | |||
Sbjct 20530 ATTAAAGTACGCAGGTACTGTGACAACTGCGTTTTTTA 20567
>seq379
Length=267923
Score = 114 bits (126), Expect = 1e-19
Identities = 163/227 (72%), Gaps = 7/227 (3%)
Strand=Plus/Minus
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| ||||||| || | ||||| ||||| || ||||| || | |||||| ||||
Sbjct 221893 CCCTCTTCAATAGTGAGAAGAGACGCATCAAATGTACCACC-CCAAGATCAAAGTTAAGC 221835
Query 282311 ACATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364
|||||| | ||| | |||| | || ||||||||||| |||| ||||||||||
Sbjct 221834 ACATTCTTCTCTCCAACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATAGCAGCAGCA 221775
Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424
|| || || || || || | || |||||| ||||||||||| || ||||||| |||
Sbjct 221774 GTAGGCTCGTTGATGATACGCATAACATTTAGACCAGCAATGACACCACCATCTTTGGTG 221715
Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
|| || | | || || |||||||||||||| || || | ||| ||
Sbjct 221714 GCCTGACGCAGAGAGTCATTAAAATATGCAGGGACGGTGACAACAGC 221668
>seq8324
Length=70553
Score = 109 bits (120), Expect = 4e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| | || ||||||||||| ||||||||||| ||||| ||||| ||| || |||
Sbjct 29904 CCATAAGAAAGTGCAGCAGCAGTGGGTTCATTAATGATTCTTTGAACATCAAGTCCGGCA 29963
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
|||||||| ||||| || || ||||| || || | ||| || || || || || |||||
Sbjct 29964 ATTCTTCCAGCATCCTTTGTTGCTTGCCTCTGAGCATCATTGAAGTAAGCCGGGACAGTG 30023
Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523
| || || | || || ||| |||| ||||| || |||| ||||||||| |
Sbjct 30024 ACCACAGCTTTTGAAACAGTTTTACCAAGGTAAGCCTCAGCAGTTTCCTTCATTTTAGTC 30083
Query 282524 AAAATCATTGATGAAATTTG 282543
|| | | || | ||||||
Sbjct 30084 AACACAAATGCTCCAATTTG 30103
>seq28989
Length=22622
Score = 104 bits (114), Expect = 2e-16
Identities = 241/362 (67%), Gaps = 6/362 (2%)
Strand=Plus/Minus
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
||||| ||||| || ||||| | | ||| | || | | || | || | |||||
Sbjct 2478 TTATCGAAATCCTCCCCTCCAAGATGAGTGTCACCGGTTATTGCCTTGACCTCGAAAATA 2419
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| ||||| | | | | || |||||| |||| |||| || |||||| || |
Sbjct 2418 CCCTCTTCGATTGTAAGCAAAGAAACATCGAACGTTCGGCCACTCAAATCAAAGATCATC 2359
Query 282311 ACATTCATTTCTTTG-----TCTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCA 282364
|||||| |||| || ||| | || || |||||||| || ||| |||| | ||
Sbjct 2358 ACATTCTTTTCACTGGTATTTCTCGCCTTCTTGTCAAGACCGTATGCATTGGCAGGAACA 2299
Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424
||||||||||||| ||||||| ||||| | ||| | |||| | |||| || |||
Sbjct 2298 TTTGGTTCATTAATTATTCTCATGACATTCATACCCGAAATTACCCTAACATCCTTGGTG 2239
Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484
|| |||| || || || || ||||||| ||| || |||| ||| ||| | ||| |
Sbjct 2238 GCCTGTCGCTGAGAGTCATTGAAATATGTAGGGACTGTAACAACAACATTCTTCACTGTT 2179
Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544
| |||| | |||| ||| ||| | |||| || | | | ||| ||||| || | |
Sbjct 2178 GTACCAAGAAAAGCCTCTGCAATTTCTGTCATCTTGGTGAGTACCATGGATGATATCTCT 2119
Query 282545 TC 282546
||
Sbjct 2118 TC 2117
>seq6391
Length=28792
Score = 98.7 bits (108), Expect = 7e-15
Identities = 196/289 (68%), Gaps = 6/289 (2%)
Strand=Plus/Plus
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
|| || |||||||| ||||| | | || | ||| | || || | |||| ||||
Sbjct 15696 TTGTCGAAATCTTCTCCTCCTAGATGGGTGTCTCCAGCAGTGGCCTTCACTTCAAAAATA 15755
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| ||||||| | | || | || ||| || ||||| || | |||||| || |
Sbjct 15756 CCCTCTTCAATCGTGAGGAGGGACACGTCAAAAGTGCCACCTCCAAGATCAAAGATCAAC 15815
Query 282311 ACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364
|||||| | ||| | ||| || || || ||||| || |||| ||||||||
Sbjct 15816 ACATTCTTCTCTCCAACACTGGTGGCCTTCTTGTCGAGACCGTAAGCAATGGCAGCAGCT 15875
Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424
|| || ||||| || || | || || ||||| ||||| || || ||||| || |||
Sbjct 15876 GTAGGCTCATTGATGATGCGCATGACGTTAAGTCCAGCTATGACACCAGCATCCTTGGTG 15935
Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473
|||||||| || || ||||| || |||||||| || || | || ||||
Sbjct 15936 GCTTGTCTCTGAGAGTCGTTGAAGTATGCAGGGACCGTCACCACTGCAT 15984
>seq51814
Length=2102
Score = 95.1 bits (104), Expect = 9e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730
||| |||| ||||||||||||||||| || ||||||||||| | || | || | ||
Sbjct 638 ACCTCCAGAAGTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTG 697
Query 281731 AAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789
| || |||| | | || | ||||| |||| ||||| | |||||||||||| ||||
Sbjct 698 GACCTTCTCATTACCCTCACTACTCAAGA-TAGCAGCTTGGACAGCAGCACCATAAGCAA 756
Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849
|| | ||||||||||| | | | | || | || ||||| ||||||| | |||||
Sbjct 757 CAACCTCATCAGGATTGATGCTCTTGCTGAGCTCCTTGCCATTAAAAAAATCCGTAAGAA 816
Query 281850 G 281850
|
Sbjct 817 G 817
>seq9121
Length=22643
Score = 95.1 bits (104), Expect = 9e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || |||||||| || |||| ||||| || ||||||||||||| ||||||| |||
Sbjct 7741 TTCTTGTCAAGACCGTATGCAATGACAGCAACATTTGGTTCATTAATTATTCTCATGACA 7800
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| | ||| | |||| | ||||| || ||| | |||| ||| || || || ||||||
Sbjct 7801 TTTATACCCGAAATTACCCTAGCATCCTTGGTGCCCTGTCGTTGAGAGTCATTGAAATAT 7860
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511
||||| | |||| ||| ||| | ||| | | |||| | |||| ||| |||
Sbjct 7861 GCAGGGAATGTAACAACAACATTCTTCACTATTGTACCAAGAAAAGCCTCTGCAATTTCC 7920
Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546
|||| || | | | ||| ||||| || | |||
Sbjct 7921 GTCATCTTGGTGAGTACCATGGATGATATCTCTTC 7955
>seq113
Length=168429
Score = 93.3 bits (102), Expect = 3e-13
Identities = 139/197 (71%), Gaps = 3/197 (2%)
Strand=Plus/Plus
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| | ||| | | | |||||| || |||||||| | ||||| | || | |||
Sbjct 42003 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACCAGGATGTTC 42062
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
| || | ||| || || || | ||||| |||| ||| || |||||||||||||||
Sbjct 42063 TTCTC---GCCTTTCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCAGTTGGTTCATTA 42119
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|||||||| |||||| | ||||| ||| ||| || ||||| || || ||||| ||
Sbjct 42120 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCGTCTTTTGTAGCCTGTCTCTGG 42179
Query 282437 GAATCGTTAAAATATGC 282453
| ||| || || || ||
Sbjct 42180 GCATCATTGAAGTAGGC 42196
Score = 93.3 bits (102), Expect = 3e-13
Identities = 139/197 (71%), Gaps = 3/197 (2%)
Strand=Plus/Minus
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| | ||| | | | |||||| || |||||||| | ||||| | ||| | |||
Sbjct 64665 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACAAGGATGTTC 64606
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
| || | || || || || | ||||| |||| ||| || || ||||||||||||
Sbjct 64605 TTCTC---GCCTCCCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCGGTTGGTTCATTA 64549
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|||||||| |||||| | ||||| ||| ||| |||||||| || || ||||| ||
Sbjct 64548 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCATCTTTTGTAGCCTGTCTCTGG 64489
Query 282437 GAATCGTTAAAATATGC 282453
| ||| || || || ||
Sbjct 64488 GCATCATTGAAGTAGGC 64472
>seq12197
Length=17840
Score = 91.5 bits (100), Expect = 1e-12
Identities = 120/161 (75%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 281554 TCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 281612
||||||||| || ||| |||||| |||| | ||| || ||||| || ||||||| |
Sbjct 17628 TCGTTCACCTTCATAAACTTGGATGAGTA-CACCAGGCTGGTTATCAGAGTAAGTTGAGA 17686
Query 281613 ATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671
|||| ||| ||| || ||||| || || |||||||| ||| | ||||||| |
Sbjct 17687 ATAC-CTGCTCTTTCTTGCAAGGGATGGTAGTGTTTCTCGGAATCAAGGTGGTCATCACT 17745
Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712
|||||||| || || ||||| || || ||||||||||| ||
Sbjct 17746 CCACCAGCCGTCTCCAAACCGAGTGATAGAGGAGTGACGTC 17786
>seq43983
Length=3554
Score = 89.7 bits (98), Expect = 4e-12
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730
||| |||| ||||||||||||||||| || ||||||||||| | || | || | ||
Sbjct 2106 ACCTCCAGAAGTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTG 2165
Query 281731 AAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789
| || |||| | | |||| |||| ||||| |||| | |||||||||||| ||||
Sbjct 2166 GACCTTCTCATTACCCTCACCACTCAAG-ATAGCAACTTGGACAGCAGCACCATAAGCAA 2224
Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849
| | ||||||||||| | | | | || | || ||||| ||||||| | |||||
Sbjct 2225 AAACCTCATCAGGATTGATGCTCTTGCTGAGCTCCTTGCCATTTAAAAAATCCGTAAGAA 2284
Query 281850 G 281850
|
Sbjct 2285 G 2285
>seq6020
Length=42058
Score = 87.8 bits (96), Expect = 1e-11
Identities = 250/375 (67%), Gaps = 11/375 (3%)
Strand=Plus/Minus
Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAAT 282140
||||| | ||||||| || ||||||| |||| ||| ||| | | ||| || | |
Sbjct 28868 TTAGCCCTTTCACATTCTCTCCTTAG-CTTCCCAAGTGCCTTATTATCTTTGCTT-ATGT 28811
Query 282141 CTGTTTTATATTTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATTATCAAAA 282199
|| | ||||| || |||||| | ||| | | | || | || | || |||||||
Sbjct 28810 CTTTGTTATACTTCTTCTTGACTAGCTTGATGAAATAATCC-ATAACTCTATGATCAAAA 28752
Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259
||||| ||||| || | ||| | ||| || ||| || | |||| |||| ||
Sbjct 28751 TCTTCTCCTCCTAAATGAGTGTCTCCACTAGTGGCTAGAACCTCAAAAACGCCATTATCT 28692
Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA-AAAATAAGTACATTCAT 282318
| | |||| |||||||| |||||||| || | |||| | | |||| | ||| |
Sbjct 28691 ATTGTTAAAATGCTAACATCAAATGTTCCACCCCCAAGATCATACACTAAG-ATGTTCTT 28633
Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378
|| ||| || || || || || |||||||||| || || ||||| || || |||||
Sbjct 28632 CTCATTGCCT---TTCTTGTCCAGCCCATACGCAATCGCGGCTGCAGTCGGCTCGTTAAT 28576
Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438
|| | || | | || || || | |||||||| || || ||||| |||||||
Sbjct 28575 GATACGAGCCACTTGTAACCCTGCTATCGTCCCTGCATCCTTGGTTGCTTGCCTTTGTGC 28516
Query 282439 ATCGTTAAAATATGC 282453
||| || ||||| ||
Sbjct 28515 ATCATTGAAATAAGC 28501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3721601172572244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |