Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13 194 1e-43 seq204 163 2e-34 seq39944 150 1e-30 seq73720 140 2e-27 seq213 131 1e-24 seq1540 123 2e-22 seq8949 114 1e-19 seq379 114 1e-19 seq8324 109 4e-18 seq28989 104 2e-16 seq6391 98.7 7e-15 seq51814 95.1 9e-14 seq9121 95.1 9e-14 seq113 93.3 3e-13 seq12197 91.5 1e-12 seq43983 89.7 4e-12 seq6020 87.8 1e-11 >seq13 Length=452113 Score = 194 bits (214), Expect = 1e-43 Identities = 692/1062 (65%), Gaps = 40/1062 (4%) Strand=Plus/Minus Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483 |||||| |||||| | ||||| |||||||| | || || ||| || ||||| | Sbjct 245334 CGGCAGACACATTCAAGATACCGTTGGCATCAATGTCGAAACAGACAGTGATCTGAGGAA 245275 Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543 | || | ||||||| ||||| || ||| | ||| | || || || || || | Sbjct 245274 CACCACGGGGAGCAGGCGGGATTCCAGACAACTCGAATTTACCTAGCAAGTTGTTGTCCT 245215 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 | || | || || || || ||| ||||| || | | || || ||||| | Sbjct 245214 TGGTCCTTGCTCTCTCTCCTTCATAAACCTGGATCAACACACCGGGCTGGTTGTCTGAGT 245155 Query 281604 AAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATA 281659 |||||| || ||| ||| || || || || |||||||| ||||| | | Sbjct 245154 AAGTTGAGAAAACTTGCTCTTTCTTTGTCGGGATGGTGGTGTTTCTCGGGATCAAGACT- 245096 Query 281660 TTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGG 281719 ||||| | ||| ||||| || || | ||| | ||| || ||||| ||||| | ||| Sbjct 245095 ---GTCATGACACCGCCAGCAGTCTCAAGACCCAAAGAGAGTGGAGTAACATCCAATAGA 245039 Query 281720 ACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGC 281778 | | | || | || |||| | | || ||||| | || ||||||| ||| || Sbjct 245038 AGCAAGTCCTGCACCTTCTCATTACCCTCGCCGCTCAAGATT-GCAGCTTGAACAGCCGC 244980 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 |||||| |||||||| || || ||||| | | | | || | || || || ||||| Sbjct 244979 ACCATAAGCAACAGCCTCGTCGGGATTGATACTCTTGCAAAGCTCCTTTCCGTTAAAAAA 244920 Query 281839 ATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 281897 | || || || ||| || || ||||| | || || || ||||| | |||| | Sbjct 244919 GTCCTGCAACAA-TTGCTGAACTTTCGGAATTCTAGTGGAACCACCAACAAGAACAACAT 244861 Query 281898 CATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 281956 |||| || | | | || |||| || | |||| ||| || ||||| || || | | Sbjct 244860 CATGGACA-GAGCTCTTGTCCATCTTAGCATCCCTCAAACACTTCTCAACTGGCTCCATA 244802 Query 281957 CCAGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014 | ||| ||||| || || ||| ||||||||| ||| | |||| | || Sbjct 244801 CACTTTCTGAACAAATCCATGTTCAA--TTCTTCGAAACGAGCACGGGTAATGGA-ACTG 244745 Query 282015 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAA 282070 || || |||| ||||| |||| ||||||| ||||| || ||||| ||| || || Sbjct 244744 TAGAAATCAACACCTTCATACAATGAATCAATCTCAATTGTGGTTTGTGCAGTGGATGA- 244686 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGA 282129 || ||| | | || || | |||||| || || || | ||| | |||| ||| | | Sbjct 244685 GAGAGTTCTCTTT--GCTCTTTCACAGGCAGTTCTCAATCTCC-TAAGAGCTCTAGGGTT 244629 Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 282189 | | | || | || | || ||||| || || | |||| | | || | | Sbjct 244628 TCCGGTAATGTCCTTCTTGTTCTTCCTCTTAAACTCCTGAACAAAGTGATTAACCATTCT 244569 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 || |||||||||||||||||||| | || | || | ||||| | |||| ||| | Sbjct 244568 GTTGTCAAAATCTTCACCTCCCAAATGGGTGTCACCAGCTGTAGCCTTGACTTCGAATAT 244509 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 || ||||||| || | ||||| ||||| || || || || | |||||| || | Sbjct 244508 ACCCTCTTCAATAGTGAGAAGAGAGACATCGAAAGTACCGCCTCCAAGATCAAAGATCAA 244449 Query 282310 TACATTCATTTCT-------TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGC 282360 |||||| | || |||| || || |||||||||||||| |||| |||||| Sbjct 244448 GACATTCTTCTCACCAACACTTGT---GGCCTTCTTATCAAGACCATAAGCAATAGCAGC 244392 Query 282361 AGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 282420 ||| ||||| ||||||||||| | || ||||| || |||||||| || ||||| || Sbjct 244391 AGCTGTTGGCTCATTAATAATACGCATGACATTGAGTCCAGCAATGACACCGGCATCCTT 244332 Query 282421 AGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 || ||||| | || || || || || || ||||| ||||| Sbjct 244331 GGTTGCTTGACGCTGAGAGTCATTGAAGTAAGCAGGGACAGT 244290 >seq204 Length=216821 Score = 163 bits (180), Expect = 2e-34 Identities = 586/901 (65%), Gaps = 29/901 (3%) Strand=Plus/Minus Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTC 281648 ||||||||| ||||| || | || || ||| || ||| || || || ||||||| Sbjct 36947 TTGATTATCCGAATACGTCGAGAAGAC-CTGCTCCTTCTTAGTCGGGATCGTCGTGTTTC 36889 Query 281649 T----ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGA 281704 | ||||| | |||||| | |||||||| || || ||||| | | | || Sbjct 36888 TCGGGATCAACAC----GGTCATCACGCCACCAGCCGTCTCCAAACCCAAACTCAACGGC 36833 Query 281705 GTGACATC-AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 281763 || || || ||| | |||| | ||||| || ||||| | || |||||| || Sbjct 36832 GTCACGTCCAACAACAACAAC-TCTTGAACCTTCTCATCTCCCTCGCCCGTAAGAATCGC 36774 Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823 || |||| || || ||||| || || || ||||| ||||| | | | | | | | Sbjct 36773 CGCCTGAACCGCCGCGCCATACGCCACCGCCTCATCGGGATTTATACTCTTACACAACTC 36714 Query 281824 TTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 281882 || ||||||||||||| ||| |||| |||| | ||| ||||| | | ||| || | Sbjct 36713 CTTCCCATTGAAAAAATCTTGCAAGA-GTTGCTGAATCTTTGGAATTCTCGTTGACCCAC 36655 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 |||| || |||| |||| || || ||||||| |||| |||| || ||| | Sbjct 36654 CAACCAAAACAACCTCATCAACTTGACTCTTATCCATCTTTGCATCCCTCAAGCATTTCT 36595 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | || || || | || ||||||||||| | | || || || |||| |||| Sbjct 36594 CCACCGGCTCCATACACTTCCTAAACAAGTCCATATTCAACTCCTCAAACCTAGCCCTAG 36535 Query 282003 TAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA 282061 |||||| | | || || ||||| || |||||||| || |||| || ||||| || || Sbjct 36534 TAAGAG-GCGAGTAAAAGTCAATCCCCTCGAACAACGAGTCAATCTCGATCGTCGTCTGC 36476 Query 282062 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 282121 | || || || | || || |||||||| || ||||| |||| || | |||||| || Sbjct 36475 GAGGACGACGACAAAGCTCGCTTAGCACGCTCGCATGCGGTCCGAAGCCGTCGTAACGC- 36417 Query 282122 TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG-- 282179 || ||| ||| | ||| ||| | ||| || || | |||| ||| Sbjct 36416 -CCGCGCATTCCCGGAAAGATCTTTCTTATGCTTCCTTCTAAACTCCGACACGAAATGGT 36358 Query 282180 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 282239 | || | ||||| || ||||| || ||||| | | |||| || | ||| || | | Sbjct 36357 TCACCATTCGATTGTCGAAATCCTCGCCTCCAAGATGCGTATCGCCCGCCGTCGCCTTAA 36298 Query 282240 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299 | | ||| | ||| ||||| | || || | || || || || || || || | | Sbjct 36297 CCTCGAAGATTCCTTCTTCGATAGTTAAGATAGACACGTCGAAAGTGCCGCCCCCGAGGT 36238 Query 282300 CAAAAATAAGTACATT-CATT---TCTTTGTCTTGG-----TTTTTATCAAGACCATACG 282350 | || ||||| || || | | | ||||| || || || || |||||||||| Sbjct 36237 CGAATATAAGGACGTTACGCTCCCCCGTTGTCCGGGCGGCCTTCTTGTCGAGACCATACG 36178 Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410 ||| || || || || || || ||||| || | | || || || ||||||| | Sbjct 36177 CAATGGCGGCGGCCGTCGGCTCGTTAATGATCCGGATGACGTTGAGGGCAGCAATCGAGC 36118 Query 282411 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 282470 | || ||||| |||||||| | ||| || ||||| || || || || || || | |||| Sbjct 36117 CGGCGTCTTTGGTGGCTTGGCGTTGGGAGTCGTTGAAGTAGGCGGGGACGGTTACGACGG 36058 Query 282471 C 282471 | Sbjct 36057 C 36057 >seq39944 Length=4033 Score = 150 bits (166), Expect = 1e-30 Identities = 326/478 (68%), Gaps = 10/478 (2%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| ||||| || ||||| || | || || ||| ||||| || || || | Sbjct 778 ACATTGAGAATGCCGTTGGCGTCAATGTCGAAGCAGACCGTGATTTGCGGAACGCCCCGA 837 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 |||| |||||||| || | | || | ||||| ||||| ||||| || | Sbjct 838 GGAGCTGGTGGGATTCCAGAGAGCTCGAACTTGCCCAGTAAGTTATTGTCTTTTGTTCTT 897 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 ||||||||| || ||| |||||| || ||| || ||||| || ||||||| Sbjct 898 GCTCGTTCACCTTCATAAACTTGGATTAGCACACCAGGCTGGTTATCGGAGTAAGTTGAG 957 Query 281612 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 ||||| ||| ||| || ||||| || || |||||||| ||| | ||||||| | Sbjct 958 AATAC-CTGCTCTTTCTTGCAAGGGATAGTAGTGTTTCTCGGAATCAAGGTGGTCATTAC 1016 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||||| || || || ||||| || || ||||||||||| || | | | || || || Sbjct 1017 TCCACCCGCCGTCTCCAAACCGAGCGATAGAGGAGTGACGTCCAGCAACAGAAGATCCTG 1076 Query 281731 AAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 || || | || | | ||| |||| ||||| || || | |||||||||||||| | Sbjct 1077 AACCTTCTGATTACCCTCGCCACTCAAG-ATAGCAGCCTGGACTGCAGCACCATATGCTA 1135 Query 281790 CAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAA 281846 |||||||||| || || | | || || || | ||| |||||||| || | ||| || Sbjct 1136 CAGCTTCATCCGGGTTGATGCTCTTGCA--TAACTCTTTCCCATTGAAGAAGTCTTGCAA 1193 Query 281847 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904 ||| ||| || || ||||| || | ||| || ||||| || ||||| ||||| || Sbjct 1194 -AAGCTGTTGAACTTTTGGAATCCGGGTTGAGCCACCAACCAACACAATATCATGGAC 1250 >seq73720 Length=1174 Score = 140 bits (154), Expect = 2e-27 Identities = 293/432 (68%), Gaps = 11/432 (3%) Strand=Plus/Plus Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT-- 282326 |||| |||||| |||||||| |||| |||||| || | |||||| | || | Sbjct 40 AGAGAAACATCGAATGTTCCACCGCCCAAATCAAAGATCAACACATTCTTCTCCCCGGTA 99 Query 282327 ---CTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 |||| || || |||||||| || |||| ||||||||||||||||||||||| ||| Sbjct 100 CTGCTTGCCTTCTTGTCAAGACCGTATGCAATGGCAGCAGCAGTTGGTTCATTAATGATT 159 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 |||| ||||| | |||| |||| || ||||| || ||||| |||| || || || Sbjct 160 CTCATGACATTCATTCCAGAAATTACCCCAGCATCCTTGGTGGCCTGTCGCTGAGAGTCA 219 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 || ||||| ||||| || |||| ||| |||| | ||| | | |||| | |||| | Sbjct 220 TTGAAATAAGCAGGGACTGTAACAACAGCATTCTTCACTGTTGTACCAAGAAAAGCCTCT 279 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTG 282562 || ||| ||||| || | | | ||| |||||||| | ||| | ||||||| Sbjct 280 GCAATTTCCTTCATCTTGGTGAGTACCATGGATGAAATCTCTTCAGCGCTGAATTGCTTC 339 Query 282563 GATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACC---AACATTAATAACTTT 282618 || |||| ||| || ||| || || | ||| | || ||| ||||| Sbjct 340 TCCTCGCCCTTGA-ATGTCACAACAATCATCGGCTTGTCACCGGGACCAGGAATCACTTT 398 Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 282678 ||||||||||| |||||| || || || | ||| |||| || ||||| || Sbjct 399 AAATGGCCAATGTTTCATGTCACTCTGTACCGACGGATCACTAAACCTCCTTCCAATCAA 458 Query 282679 TCGTTTTGCATC 282690 || |||||||| Sbjct 459 TCTCTTTGCATC 470 >seq213 Length=112984 Score = 131 bits (144), Expect = 1e-24 Identities = 471/727 (65%), Gaps = 20/727 (3%) Strand=Plus/Plus Query 281758 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 281817 |||||| |||| ||| |||||||||||||| ||||||||||| || |||| ||| Sbjct 48580 AATAGCAGCTTCAATTGCAGCACCATATGCCACAGCTTCATCTGGGTTAATGCTTTTGCA 48639 Query 281818 TAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATG 281876 || | || ||| |||||||| ||| || |||||| |||||| |||| | ||| | Sbjct 48640 AAGCTCCTTGCCACAGAAAAAATCTTGCAA-AAGTTGCTGCACCTTAAGAATCCTAGAGG 48698 Query 281877 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA- 281935 | || ||||| | || | |||| | || |||| |||| |||| ||| Sbjct 48699 AACCACCAACAAGAACTACATCATCGATAACACTCTTGTCCATCTTTGCATCCCTCAAAC 48758 Query 281936 ACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAG-TCTGAACAAAGTTCTTCGAATTT 281994 | | || | || |||| || || | || || |||| || | ||||| || | Sbjct 48759 AAATCTTAATAGGCTTCACA--CATCTTTCAAAGAGATCTGTACTCATCTCTTCAAACAT 48816 Query 281995 AGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGT 282054 ||| ||||| ||| | |||| || || || || ||| | |||| ||||| || Sbjct 48817 AGCATGAGTAACAGTAGTGCAAAAATCTATGCCCTCAAAGAAACAGTCAATCTCAATGGT 48876 Query 282055 AGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCG 282114 ||||| ||| | ||| || || | || || || ||||| || || | | || | Sbjct 48877 AGTTTCAGTAGTAGATGAGAGAGTTCGCTTTGCTATCTCACAAGCAGTTTTCAACCTGCT 48936 Query 282115 TAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACA 282172 | || ||| | || ||| | ||| |||| | || || || || || |||| Sbjct 48937 AATAGCCCTTG--GGTTCCCATTGATATCCTTTTTGTGCTTACTTTTAAATTCCCTAACA 48994 Query 282173 CACCATGTTACAAGA--CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACG 282230 || ||| | || | | || |||||| || || ||||| || | ||||| ||| | | Sbjct 48995 CA--ATGATTCACCATTCTATAATCAAATTCCTCCCCTCCAAAGTGAGTATCTCCAGCTG 49052 Query 282231 TAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290 | ||| | || | | | |||| || | | | || ||||||| | || || | Sbjct 49053 TTGCTATAACATCATAGATACCATTATCCATTTTGAGTACAGAAACATCAAGCGTGCCGC 49112 Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATCAAGAC 282344 |||| || | ||| || | |||||| | || || ||| | |||| ||||| Sbjct 49113 CACCAATGTGAAATATCAAGACATTCCTCTCAACAGAATTACTTTGCATCTTATTAAGAC 49172 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| | |||||||||||| | | || |||| || | || | ||| || || |||| Sbjct 49173 CATAAGACAAAGCAGCAGCACTAGACTCGTTAAGGATACGCACGATATTCAGTCCTGCAA 49232 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | | |||||||| || |||||||| | || ||| | || |||| ||||| ||||| | Sbjct 49233 TAATGCCTGCATCCTTTGTGGCTTGGCGCTGAGAACCATTGAAATGAGCAGGTACAGTCA 49292 Query 282465 TAACGGC 282471 ||| || Sbjct 49293 CAACAGC 49299 >seq1540 Length=57101 Score = 123 bits (136), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||||| ||||| |||||||||||||||||| ||||| || || ||| Sbjct 19086 CCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCTGCA 19145 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||||| || || || || || ||||| ||||||| ||| || || ||||| ||||||||| Sbjct 19146 ATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACAGTA 19205 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 || ||||| | | || ||||||| ||||| || |||| ||||| ||| | Sbjct 19206 ATGACGGCTTTGGAAACAGACTTTCCAAGGTAAGCCTCGGCAGTTTCCTTCATCTTAGTC 19265 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563 || || | | |||||| || |||||||| |||| Sbjct 19266 AAGATATAAGCTCCAATTTGGCTAGGTGAATATTG-TTGG 19304 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || || || | ||| || |||||||| ||||||||||| ||| | ||||||| | || Sbjct 19083 AATCCATAAGAAAGGGCAGCTGCAGTGGGTTCATTAATAATTCTCTGAACATCGAGTCCT 19142 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 |||||| | | | || |||||||| || ||||| ||||| || |||||||| ||| Sbjct 19143 GCAATTCTCCCCGCGTCCTTCGTTGCTTGCCTTTGTGCATCATTGAAGTATGCTGGAACA 19202 Query 86236 GTAATAACTGCTTT 86249 ||||| || ||||| Sbjct 19203 GTAATGACGGCTTT 19216 >seq8949 Length=22983 Score = 114 bits (126), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT--TTG 282325 ||||| ||||| || ||||| || | |||||| || || || ||| | ||| | Sbjct 20350 AAGAGAGACATCGAATGTACCACCTCCAAGATCAAAGATCAGCACGTTCTTCTCTCCTAC 20409 Query 282326 TCTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 |||| ||||| ||||| ||||| |||| ||| ||||| || |||||||| || || Sbjct 20410 ACTTGTGGCTTTTTTGTCAAGCCCATAAGCAATAGCGGCAGCTGTGGGTTCATTGATGAT 20469 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | || ||||||||||||||||| || |||||||| || ||||| | ||| || || Sbjct 20470 ACGCATGACATTAAGACCAGCAATGACACCAGCATCTTTGGTAGCTTGACGTTGGGAGTC 20529 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 ||||| || ||||| || || | ||| || | | ||| Sbjct 20530 ATTAAAGTACGCAGGTACTGTGACAACTGCGTTTTTTA 20567 >seq379 Length=267923 Score = 114 bits (126), Expect = 1e-19 Identities = 163/227 (72%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||||| || | ||||| ||||| || ||||| || | |||||| |||| Sbjct 221893 CCCTCTTCAATAGTGAGAAGAGACGCATCAAATGTACCACC-CCAAGATCAAAGTTAAGC 221835 Query 282311 ACATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | ||| | |||| | || ||||||||||| |||| |||||||||| Sbjct 221834 ACATTCTTCTCTCCAACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATAGCAGCAGCA 221775 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || || || || || || | || |||||| ||||||||||| || ||||||| ||| Sbjct 221774 GTAGGCTCGTTGATGATACGCATAACATTTAGACCAGCAATGACACCACCATCTTTGGTG 221715 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || || | | || || |||||||||||||| || || | ||| || Sbjct 221714 GCCTGACGCAGAGAGTCATTAAAATATGCAGGGACGGTGACAACAGC 221668 >seq8324 Length=70553 Score = 109 bits (120), Expect = 4e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||||||||||| ||||||||||| ||||| ||||| ||| || ||| Sbjct 29904 CCATAAGAAAGTGCAGCAGCAGTGGGTTCATTAATGATTCTTTGAACATCAAGTCCGGCA 29963 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 |||||||| ||||| || || ||||| || || | ||| || || || || || ||||| Sbjct 29964 ATTCTTCCAGCATCCTTTGTTGCTTGCCTCTGAGCATCATTGAAGTAAGCCGGGACAGTG 30023 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 | || || | || || ||| |||| ||||| || |||| ||||||||| | Sbjct 30024 ACCACAGCTTTTGAAACAGTTTTACCAAGGTAAGCCTCAGCAGTTTCCTTCATTTTAGTC 30083 Query 282524 AAAATCATTGATGAAATTTG 282543 || | | || | |||||| Sbjct 30084 AACACAAATGCTCCAATTTG 30103 >seq28989 Length=22622 Score = 104 bits (114), Expect = 2e-16 Identities = 241/362 (67%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||| ||||| || ||||| | | ||| | || | | || | || | ||||| Sbjct 2478 TTATCGAAATCCTCCCCTCCAAGATGAGTGTCACCGGTTATTGCCTTGACCTCGAAAATA 2419 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||| | | | | || |||||| |||| |||| || |||||| || | Sbjct 2418 CCCTCTTCGATTGTAAGCAAAGAAACATCGAACGTTCGGCCACTCAAATCAAAGATCATC 2359 Query 282311 ACATTCATTTCTTTG-----TCTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| |||| || ||| | || || |||||||| || ||| |||| | || Sbjct 2358 ACATTCTTTTCACTGGTATTTCTCGCCTTCTTGTCAAGACCGTATGCATTGGCAGGAACA 2299 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||||||||||| ||||||| ||||| | ||| | |||| | |||| || ||| Sbjct 2298 TTTGGTTCATTAATTATTCTCATGACATTCATACCCGAAATTACCCTAACATCCTTGGTG 2239 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484 || |||| || || || || ||||||| ||| || |||| ||| ||| | ||| | Sbjct 2238 GCCTGTCGCTGAGAGTCATTGAAATATGTAGGGACTGTAACAACAACATTCTTCACTGTT 2179 Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544 | |||| | |||| ||| ||| | |||| || | | | ||| ||||| || | | Sbjct 2178 GTACCAAGAAAAGCCTCTGCAATTTCTGTCATCTTGGTGAGTACCATGGATGATATCTCT 2119 Query 282545 TC 282546 || Sbjct 2118 TC 2117 >seq6391 Length=28792 Score = 98.7 bits (108), Expect = 7e-15 Identities = 196/289 (68%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || || |||||||| ||||| | | || | ||| | || || | |||| |||| Sbjct 15696 TTGTCGAAATCTTCTCCTCCTAGATGGGTGTCTCCAGCAGTGGCCTTCACTTCAAAAATA 15755 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||||| | | || | || ||| || ||||| || | |||||| || | Sbjct 15756 CCCTCTTCAATCGTGAGGAGGGACACGTCAAAAGTGCCACCTCCAAGATCAAAGATCAAC 15815 Query 282311 ACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | ||| | ||| || || || ||||| || |||| |||||||| Sbjct 15816 ACATTCTTCTCTCCAACACTGGTGGCCTTCTTGTCGAGACCGTAAGCAATGGCAGCAGCT 15875 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || || ||||| || || | || || ||||| ||||| || || ||||| || ||| Sbjct 15876 GTAGGCTCATTGATGATGCGCATGACGTTAAGTCCAGCTATGACACCAGCATCCTTGGTG 15935 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 |||||||| || || ||||| || |||||||| || || | || |||| Sbjct 15936 GCTTGTCTCTGAGAGTCGTTGAAGTATGCAGGGACCGTCACCACTGCAT 15984 >seq51814 Length=2102 Score = 95.1 bits (104), Expect = 9e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| |||| ||||||||||||||||| || ||||||||||| | || | || | || Sbjct 638 ACCTCCAGAAGTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTG 697 Query 281731 AAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | || |||| | | || | ||||| |||| ||||| | |||||||||||| |||| Sbjct 698 GACCTTCTCATTACCCTCACTACTCAAGA-TAGCAGCTTGGACAGCAGCACCATAAGCAA 756 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 || | ||||||||||| | | | | || | || ||||| ||||||| | ||||| Sbjct 757 CAACCTCATCAGGATTGATGCTCTTGCTGAGCTCCTTGCCATTAAAAAAATCCGTAAGAA 816 Query 281850 G 281850 | Sbjct 817 G 817 >seq9121 Length=22643 Score = 95.1 bits (104), Expect = 9e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||||||| || |||| ||||| || ||||||||||||| ||||||| ||| Sbjct 7741 TTCTTGTCAAGACCGTATGCAATGACAGCAACATTTGGTTCATTAATTATTCTCATGACA 7800 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || | ||| | |||| | ||||| || ||| | |||| ||| || || || |||||| Sbjct 7801 TTTATACCCGAAATTACCCTAGCATCCTTGGTGCCCTGTCGTTGAGAGTCATTGAAATAT 7860 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 ||||| | |||| ||| ||| | ||| | | |||| | |||| ||| ||| Sbjct 7861 GCAGGGAATGTAACAACAACATTCTTCACTATTGTACCAAGAAAAGCCTCTGCAATTTCC 7920 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546 |||| || | | | ||| ||||| || | ||| Sbjct 7921 GTCATCTTGGTGAGTACCATGGATGATATCTCTTC 7955 >seq113 Length=168429 Score = 93.3 bits (102), Expect = 3e-13 Identities = 139/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | | |||||| || |||||||| | ||||| | || | ||| Sbjct 42003 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACCAGGATGTTC 42062 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | || | ||| || || || | ||||| |||| ||| || ||||||||||||||| Sbjct 42063 TTCTC---GCCTTTCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCAGTTGGTTCATTA 42119 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||||||| |||||| | ||||| ||| ||| || ||||| || || ||||| || Sbjct 42120 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCGTCTTTTGTAGCCTGTCTCTGG 42179 Query 282437 GAATCGTTAAAATATGC 282453 | ||| || || || || Sbjct 42180 GCATCATTGAAGTAGGC 42196 Score = 93.3 bits (102), Expect = 3e-13 Identities = 139/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | | |||||| || |||||||| | ||||| | ||| | ||| Sbjct 64665 TCAATTGTCAAGACACTGACATCAAAAGTACCACCACCAAGGTCAAAGACAAGGATGTTC 64606 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | || | || || || || | ||||| |||| ||| || || |||||||||||| Sbjct 64605 TTCTC---GCCTCCCTTCTTGTCCAACCCATAAGCAATAGCGGCTGCGGTTGGTTCATTA 64549 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||||||| |||||| | ||||| ||| ||| |||||||| || || ||||| || Sbjct 64548 ATAATTCTGGCAACATTTAATCCAGCGATTACTCCAGCATCTTTTGTAGCCTGTCTCTGG 64489 Query 282437 GAATCGTTAAAATATGC 282453 | ||| || || || || Sbjct 64488 GCATCATTGAAGTAGGC 64472 >seq12197 Length=17840 Score = 91.5 bits (100), Expect = 1e-12 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 281554 TCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 281612 ||||||||| || ||| |||||| |||| | ||| || ||||| || ||||||| | Sbjct 17628 TCGTTCACCTTCATAAACTTGGATGAGTA-CACCAGGCTGGTTATCAGAGTAAGTTGAGA 17686 Query 281613 ATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 |||| ||| ||| || ||||| || || |||||||| ||| | ||||||| | Sbjct 17687 ATAC-CTGCTCTTTCTTGCAAGGGATGGTAGTGTTTCTCGGAATCAAGGTGGTCATCACT 17745 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 |||||||| || || ||||| || || ||||||||||| || Sbjct 17746 CCACCAGCCGTCTCCAAACCGAGTGATAGAGGAGTGACGTC 17786 >seq43983 Length=3554 Score = 89.7 bits (98), Expect = 4e-12 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| |||| ||||||||||||||||| || ||||||||||| | || | || | || Sbjct 2106 ACCTCCAGAAGTTTCTAAACCAAGAGAGAGGGGAGTGACATCCAAAAGAAGAAGGTCCTG 2165 Query 281731 AAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | || |||| | | |||| |||| ||||| |||| | |||||||||||| |||| Sbjct 2166 GACCTTCTCATTACCCTCACCACTCAAG-ATAGCAACTTGGACAGCAGCACCATAAGCAA 2224 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 | | ||||||||||| | | | | || | || ||||| ||||||| | ||||| Sbjct 2225 AAACCTCATCAGGATTGATGCTCTTGCTGAGCTCCTTGCCATTTAAAAAATCCGTAAGAA 2284 Query 281850 G 281850 | Sbjct 2285 G 2285 >seq6020 Length=42058 Score = 87.8 bits (96), Expect = 1e-11 Identities = 250/375 (67%), Gaps = 11/375 (3%) Strand=Plus/Minus Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAAT 282140 ||||| | ||||||| || ||||||| |||| ||| ||| | | ||| || | | Sbjct 28868 TTAGCCCTTTCACATTCTCTCCTTAG-CTTCCCAAGTGCCTTATTATCTTTGCTT-ATGT 28811 Query 282141 CTGTTTTATATTTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATTATCAAAA 282199 || | ||||| || |||||| | ||| | | | || | || | || ||||||| Sbjct 28810 CTTTGTTATACTTCTTCTTGACTAGCTTGATGAAATAATCC-ATAACTCTATGATCAAAA 28752 Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259 ||||| ||||| || | ||| | ||| || ||| || | |||| |||| || Sbjct 28751 TCTTCTCCTCCTAAATGAGTGTCTCCACTAGTGGCTAGAACCTCAAAAACGCCATTATCT 28692 Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA-AAAATAAGTACATTCAT 282318 | | |||| |||||||| |||||||| || | |||| | | |||| | ||| | Sbjct 28691 ATTGTTAAAATGCTAACATCAAATGTTCCACCCCCAAGATCATACACTAAG-ATGTTCTT 28633 Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 || ||| || || || || || |||||||||| || || ||||| || || ||||| Sbjct 28632 CTCATTGCCT---TTCTTGTCCAGCCCATACGCAATCGCGGCTGCAGTCGGCTCGTTAAT 28576 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 || | || | | || || || | |||||||| || || ||||| ||||||| Sbjct 28575 GATACGAGCCACTTGTAACCCTGCTATCGTCCCTGCATCCTTGGTTGCTTGCCTTTGTGC 28516 Query 282439 ATCGTTAAAATATGC 282453 ||| || ||||| || Sbjct 28515 ATCATTGAAATAAGC 28501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3721601172572244