Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq184 120 3e-22 seq4209 113 4e-20 seq48644 107 2e-18 seq45117 107 2e-18 seq1982 105 6e-18 seq10588 98.7 1e-15 seq87 96.9 3e-15 seq35801 95.1 1e-14 seq9434 93.3 4e-14 seq22012 86.0 6e-12 >seq184 Length=120086 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| |||||||||||| | | || | | | ||||| |||||||| || Sbjct 5423 GTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTTCGGCCA-TCCTCTAGCTGCTTACC 5365 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || ||||| |||||||| || || || ||||||||||| ||||||| ||| Sbjct 5364 GGCGAAGATTAGCCGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTTGCCTT 5305 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| || || || |||| ||| | || || || ||||| || Sbjct 5304 CACATTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATCGTCTTACCCGTCAGGGT 5245 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 5244 TTTGACGAAAATCTGCAT 5227 >seq4209 Length=73032 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||||||||| | ||||| ||||||||||| || ||||| ||||||||| Sbjct 79 TCCTCGAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTG 138 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | ||| || || | ||| | | Sbjct 139 TCTTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCAACCTCTAGGGTTATG 198 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||||| ||||| || || |||||||| Sbjct 199 GTCTTTCCGGTCAATGTTTTCACAAAGATCTGCAT 233 >seq48644 Length=2856 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||| ||||| || || || ||||| ||| | | || |||| |||||| ||||| ||| Sbjct 1863 GGTAGACTCCTTTTGAATGTTGTAGTCGGCGAGGGT--ACGACCGTCCTCTAGCTGTTTG 1920 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | ||||| ||||||||||| || ||||||||||||||||| |||||| Sbjct 1921 CCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTCGCT 1980 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||||||| | || || || | ||| | || || ||||| || Sbjct 1981 TTCACATTGTCGATGGTGTCGGAAGATTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGT 2040 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 2041 GTTTTCACAAAGATCTGCAT 2060 >seq45117 Length=3449 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||| ||||| || || || ||||| ||| | | || |||| |||||| ||||| ||| Sbjct 2456 GGTAGACTCCTTTTGAATGTTGTAGTCGGCGAGGGT--ACGACCGTCCTCTAGCTGTTTG 2513 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | ||||| ||||||||||| || ||||||||||||||||| |||||| Sbjct 2514 CCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTCGCT 2573 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||||||| | || || || | ||| | || || ||||| || Sbjct 2574 TTCACATTGTCGATGGTGTCGGAAGATTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGT 2633 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 2634 GTTTTCACAAAGATCTGCAT 2653 >seq1982 Length=56187 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| ||||||||||| || ||| | ||||| ||||||||||| || ||||| || ||||| Sbjct 32274 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 32215 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||| | | || | ||||||| || ||| || |||| ||| | Sbjct 32214 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTTAT 32155 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || ||||| ||||| |||||||| Sbjct 32154 CGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 32119 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| ||||||||||| || ||| | ||||| ||||||||||| || ||||| || ||||| Sbjct 21937 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 21878 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||| | | || | ||||||| | ||| || |||| ||| | Sbjct 21877 GTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTAT 21818 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || | ||||| ||||| |||||||| Sbjct 21817 CGTCTTCCCCGTTAAGGTTTTCACGAAGATCTGCAT 21782 >seq10588 Length=20159 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| ||||||||||| | | || ||||||||||| Sbjct 1276 ATGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCTAGGGTTCTTCCATCCTCGAGCTG 1335 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || |||| ||||||||| || || || || |||||||| |||||| Sbjct 1336 CTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 1395 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | ||||||| | ||| || || | ||||| || || || || Sbjct 1396 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATAGTCTTTCCAGT 1455 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||| Sbjct 1456 GAGCGTCTTGACAAAGATCTGCAT 1479 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| ||||||||||| | | || | | | ||||| |||||||| | Sbjct 1054 GGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTACGGCCA-TCCTCAAGCTGCTTTC 1112 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||| ||||| ||||| || ||||||||||| |||||| || Sbjct 1113 CAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATCCCTTCCTTGTCCTGGATCTTAGCCT 1172 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || || | | ||| || || | ||||| ||| ||||| |||| | Sbjct 1173 TCACATTATCAATAGTATCAGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAATG 1232 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 1233 TCTTAACAAAGATCTGCAT 1251 >seq87 Length=177581 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| || ||||| ||||| ||||| | | ||| ||| | || || | Sbjct 55372 AAGTGGAGGGTGGATTCCTTCTGGATATTATAATCTGCAAGTGTGCGACCA-TCTTCCAA 55430 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | ||||||| ||| ||||| || || |||||||||||||| || Sbjct 55431 TTGCTTCCCGGCAAAGATGAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGTAT 55490 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||||| | ||| || |||| ||||| || ||||| Sbjct 55491 CTTAGCCTTTACGTTGTCAATTGTGTCGGAGCTCTCAACTTCGAGGGTGATCGTCTTGCC 55550 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || ||||| Sbjct 55551 AGTTAGGGTCTTGACAAAGATTTGCAT 55577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||||||||||||| || || ||||| | | || || ||||| Sbjct 54916 AAATGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGGGTCCTTCCATCTTCGAGT 54975 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | || | | ||||||||| || ||||| || ||||| || ||| Sbjct 54976 TGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGAATC 55035 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | |||| ||||| | | ||| || || | || | ||| || || Sbjct 55036 TTAGCTTTGACGTTGTCAATTGTGTCAGAGCTCTCAACTTCCAACGTAATGGTCTTTCCC 55095 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||||||||| Sbjct 55096 GTAAGGGTTTTGACGAAAATCTGCAT 55121 >seq35801 Length=5147 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || |||||||| ||| || | | | |||||||||||||| | Sbjct 327 GGTCGATTCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCA-TCCTCGAGCTGCTTCC 269 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| || || || || |||||||| ||||| || Sbjct 268 CAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCT 209 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | || || |||| ||||| ||| || || |||| || Sbjct 208 TGACATTATCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATGGTCTTCCCTGTCAAAG 149 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 148 TCTTGACGAATATCTGCAT 130 >seq9434 Length=50679 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||| || | | ||| ||| || ||||| ||||| | Sbjct 44969 GTAGACTCCTTCTGGATATTGTAGTCAGCTA--GTGTACGCCCATCTTCGAGTTGCTTCC 45026 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| | |||||||| || ||||| ||||| || || ||| ||| || Sbjct 45027 CGGCAAAGATGAGTCTTTGCTGGTCAGGTGGGATACCTTCTTTATCTTGGATTTTTGCCT 45086 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | ||| || || | || | |||||| || ||||| | Sbjct 45087 TGACATTGTCAATAGTGTCTGAACTCTCGACCTCAAGAGTTATGGTTTTCCCAGTCAGGG 45146 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| || ||||||||||| Sbjct 45147 TTTTAACAAAAATCTGCAT 45165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| ||||||||||| | | || ||||| || Sbjct 45872 AAGTGGAGGGTGGACTCTTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCCTCTAGT 45931 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || | || ||||| || || || || |||||||| |||| Sbjct 45932 TGCTTTCCGGCAAAGATAAGTCTTTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGGATC 45991 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | |||| ||||| | | || || |||| ||||| || ||||| Sbjct 45992 TTAGCTTTTACGTTGTCAATTGTGTCAGAGCTTTCAACCTCGAGGGTGATTGTCTTGCCT 46051 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| |||||||| Sbjct 46052 GTTAGGGTTTTCACGAAGATCTGCAT 46077 >seq22012 Length=9549 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || |||||||| ||| || | | | |||||||||||||| | Sbjct 5870 GGTTGATTCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCA-TCCTCGAGCTGCTTAC 5928 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| || || || || |||||||| ||||| || Sbjct 5929 CAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCT 5988 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | || || |||| ||||| || || || || | || Sbjct 5989 TGACATTATCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATAGTCTTCCCTGTTAAAG 6048 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 6049 TCTTAACGAATATCTGCAT 6067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481078662480560