Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq184 120 3e-22
seq4209 113 4e-20
seq48644 107 2e-18
seq45117 107 2e-18
seq1982 105 6e-18
seq10588 98.7 1e-15
seq87 96.9 3e-15
seq35801 95.1 1e-14
seq9434 93.3 4e-14
seq22012 86.0 6e-12
>seq184
Length=120086
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| |||||||||||| | | || | | | ||||| |||||||| ||
Sbjct 5423 GTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTTCGGCCA-TCCTCTAGCTGCTTACC 5365
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || ||||| |||||||| || || || ||||||||||| ||||||| |||
Sbjct 5364 GGCGAAGATTAGCCGTTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTTGCCTT 5305
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| || || || |||| ||| | || || || ||||| ||
Sbjct 5304 CACATTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATCGTCTTACCCGTCAGGGT 5245
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||||||||||||
Sbjct 5244 TTTGACGAAAATCTGCAT 5227
>seq4209
Length=73032
Score = 113 bits (124), Expect = 4e-20
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|||||||||||||||||||| | ||||| ||||||||||| || ||||| |||||||||
Sbjct 79 TCCTCGAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTG 138
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | | ||| || || | ||| | |
Sbjct 139 TCTTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCAACCTCTAGGGTTATG 198
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||||| ||||| || || ||||||||
Sbjct 199 GTCTTTCCGGTCAATGTTTTCACAAAGATCTGCAT 233
>seq48644
Length=2856
Score = 107 bits (118), Expect = 2e-18
Identities = 145/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
||| ||||| || || || ||||| ||| | | || |||| |||||| ||||| |||
Sbjct 1863 GGTAGACTCCTTTTGAATGTTGTAGTCGGCGAGGGT--ACGACCGTCCTCTAGCTGTTTG 1920
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | ||||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct 1921 CCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTCGCT 1980
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | || | ||||||| | || || || | ||| | || || ||||| ||
Sbjct 1981 TTCACATTGTCGATGGTGTCGGAAGATTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGT 2040
Query 133641 GTTTTTACGAAAATCTGCAT 133660
||||| || || ||||||||
Sbjct 2041 GTTTTCACAAAGATCTGCAT 2060
>seq45117
Length=3449
Score = 107 bits (118), Expect = 2e-18
Identities = 145/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
||| ||||| || || || ||||| ||| | | || |||| |||||| ||||| |||
Sbjct 2456 GGTAGACTCCTTTTGAATGTTGTAGTCGGCGAGGGT--ACGACCGTCCTCTAGCTGTTTG 2513
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | ||||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct 2514 CCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTCGCT 2573
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | || | ||||||| | || || || | ||| | || || ||||| ||
Sbjct 2574 TTCACATTGTCGATGGTGTCGGAAGATTCAACCTCTAGGGTTATCGTCTTCCCGGTTAGT 2633
Query 133641 GTTTTTACGAAAATCTGCAT 133660
||||| || || ||||||||
Sbjct 2634 GTTTTCACAAAGATCTGCAT 2653
>seq1982
Length=56187
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| ||||||||||| || ||| | ||||| ||||||||||| || ||||| || |||||
Sbjct 32274 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 32215
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||| | | || | ||||||| || ||| || |||| ||| |
Sbjct 32214 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTTAT 32155
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || ||||| ||||| ||||||||
Sbjct 32154 CGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 32119
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| ||||||||||| || ||| | ||||| ||||||||||| || ||||| || |||||
Sbjct 21937 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 21878
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||||| ||| | | || | ||||||| | ||| || |||| ||| |
Sbjct 21877 GTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTAT 21818
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || | ||||| ||||| ||||||||
Sbjct 21817 CGTCTTCCCCGTTAAGGTTTTCACGAAGATCTGCAT 21782
>seq10588
Length=20159
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||| ||||| ||||||||||| | | || |||||||||||
Sbjct 1276 ATGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCTAGGGTTCTTCCATCCTCGAGCTG 1335
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| || || | || |||| ||||||||| || || || || |||||||| ||||||
Sbjct 1336 CTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 1395
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | || | ||||||| | ||| || || | ||||| || || || ||
Sbjct 1396 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATAGTCTTTCCAGT 1455
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || ||||||||
Sbjct 1456 GAGCGTCTTGACAAAGATCTGCAT 1479
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| ||||||||||| | | || | | | ||||| |||||||| |
Sbjct 1054 GGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTACGGCCA-TCCTCAAGCTGCTTTC 1112
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | ||||| ||||| ||||| || ||||||||||| |||||| ||
Sbjct 1113 CAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATCCCTTCCTTGTCCTGGATCTTAGCCT 1172
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| || || | | ||| || || | ||||| ||| ||||| |||| |
Sbjct 1173 TCACATTATCAATAGTATCAGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAATG 1232
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 1233 TCTTAACAAAGATCTGCAT 1251
>seq87
Length=177581
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | |||||| || ||||| ||||| ||||| | | ||| ||| | || || |
Sbjct 55372 AAGTGGAGGGTGGATTCCTTCTGGATATTATAATCTGCAAGTGTGCGACCA-TCTTCCAA 55430
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || | ||||||| ||| ||||| || || |||||||||||||| ||
Sbjct 55431 TTGCTTCCCGGCAAAGATGAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGTAT 55490
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | |||| ||||||| | ||| || |||| ||||| || |||||
Sbjct 55491 CTTAGCCTTTACGTTGTCAATTGTGTCGGAGCTCTCAACTTCGAGGGTGATCGTCTTGCC 55550
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || |||||
Sbjct 55551 AGTTAGGGTCTTGACAAAGATTTGCAT 55577
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||||||||||||||| || || ||||| | | || || |||||
Sbjct 54916 AAATGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGGGTCCTTCCATCTTCGAGT 54975
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || | | ||||||||| || ||||| || ||||| || |||
Sbjct 54976 TGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGAATC 55035
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| |||| | |||| ||||| | | ||| || || | || | ||| || ||
Sbjct 55036 TTAGCTTTGACGTTGTCAATTGTGTCAGAGCTCTCAACTTCCAACGTAATGGTCTTTCCC 55095
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||||||||
Sbjct 55096 GTAAGGGTTTTGACGAAAATCTGCAT 55121
>seq35801
Length=5147
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || || ||||| || |||||||| ||| || | | | |||||||||||||| |
Sbjct 327 GGTCGATTCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCA-TCCTCGAGCTGCTTCC 269
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | || ||||||||| || || || || |||||||| ||||| ||
Sbjct 268 CAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCT 209
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | | || || |||| ||||| ||| || || |||| ||
Sbjct 208 TGACATTATCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATGGTCTTCCCTGTCAAAG 149
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 148 TCTTGACGAATATCTGCAT 130
>seq9434
Length=50679
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|| ||||| ||||| |||||||| || | | ||| ||| || ||||| ||||| |
Sbjct 44969 GTAGACTCCTTCTGGATATTGTAGTCAGCTA--GTGTACGCCCATCTTCGAGTTGCTTCC 45026
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| | |||||||| || ||||| ||||| || || ||| ||| ||
Sbjct 45027 CGGCAAAGATGAGTCTTTGCTGGTCAGGTGGGATACCTTCTTTATCTTGGATTTTTGCCT 45086
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| | ||| || || | || | |||||| || ||||| |
Sbjct 45087 TGACATTGTCAATAGTGTCTGAACTCTCGACCTCAAGAGTTATGGTTTTCCCAGTCAGGG 45146
Query 133642 TTTTTACGAAAATCTGCAT 133660
|||| || |||||||||||
Sbjct 45147 TTTTAACAAAAATCTGCAT 45165
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||||||||||||||| ||||||||||| | | || ||||| ||
Sbjct 45872 AAGTGGAGGGTGGACTCTTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCCTCTAGT 45931
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || || | || ||||| || || || || |||||||| ||||
Sbjct 45932 TGCTTTCCGGCAAAGATAAGTCTTTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGGATC 45991
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || | | |||| ||||| | | || || |||| ||||| || |||||
Sbjct 45992 TTAGCTTTTACGTTGTCAATTGTGTCAGAGCTTTCAACCTCGAGGGTGATTGTCTTGCCT 46051
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||| ||||||||
Sbjct 46052 GTTAGGGTTTTCACGAAGATCTGCAT 46077
>seq22012
Length=9549
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || || ||||| || |||||||| ||| || | | | |||||||||||||| |
Sbjct 5870 GGTTGATTCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCA-TCCTCGAGCTGCTTAC 5928
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | || ||||||||| || || || || |||||||| ||||| ||
Sbjct 5929 CAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCT 5988
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | | || || |||| ||||| || || || || | ||
Sbjct 5989 TGACATTATCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATAGTCTTCCCTGTTAAAG 6048
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 6049 TCTTAACGAATATCTGCAT 6067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481078662480560
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