Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq184 132 4e-26
seq48644 125 6e-24
seq45117 125 6e-24
seq35801 125 6e-24
seq22012 125 6e-24
seq9434 109 5e-19
seq10588 104 2e-17
seq87 100 3e-16
seq4209 93.3 4e-14
seq1982 89.7 5e-13
seq1077 89.7 5e-13
>seq184
Length=120086
Score = 132 bits (146), Expect = 4e-26
Identities = 171/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | ||| ||||| || || |||||||||||
Sbjct 5453 CCACCACGAAGACGAAGCACCAGGTGGAGCGTCGATTCCTTCTGGATATTGTAATCGGCG 5394
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||||| | || || ||||||||||| || || || | ||| |||||||| | |||
Sbjct 5393 AGGGTTCGGCCATCCTCTAGCTGCTTACCGGCGAAGATTAGCCGTTGCTGGTCTGGTGGA 5334
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||||||| ||||| | | | | |||||| ||||| |||
Sbjct 5333 ATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCGGAGGATTCGACC 5274
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744
|| | || ||||| |||||||||| ||||| || || ||||||| ||| ||||
Sbjct 5273 TCGAGGGTTATCGTCTTACCCGTCAGGGTTTTGACGAAAATCTGCA-TCTTTGCG 5220
>seq48644
Length=2856
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | ||| |||||||||||||||||| |||||
Sbjct 1834 CCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCG 1893
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| || ||||| || || || || || | ||||||||||||| ||
Sbjct 1894 AGGGTACGACCGTCCTCTAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 1953
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||||||| |||||| |||| | | | | |||||| ||||| |||
Sbjct 1954 ATGCCTTCCTTGTCCTGGATCTTCGCTTTCACATTGTCGATGGTGTCGGAAGATTCAACC 2013
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || ||||| || || || | ||||||||||| ||||||||
Sbjct 2014 TCTAGGGTTATCGTCTTCCCGGTTAGTGTTTTCACAAAGATCTGCAT 2060
>seq45117
Length=3449
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | ||| |||||||||||||||||| |||||
Sbjct 2427 CCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCG 2486
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| || ||||| || || || || || | ||||||||||||| ||
Sbjct 2487 AGGGTACGACCGTCCTCTAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 2546
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||||||| |||||| |||| | | | | |||||| ||||| |||
Sbjct 2547 ATGCCTTCCTTGTCCTGGATCTTCGCTTTCACATTGTCGATGGTGTCGGAAGATTCAACC 2606
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || ||||| || || || | ||||||||||| ||||||||
Sbjct 2607 TCTAGGGTTATCGTCTTCCCGGTTAGTGTTTTCACAAAGATCTGCAT 2653
>seq35801
Length=5147
Score = 125 bits (138), Expect = 6e-24
Identities = 146/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| |||||||||||||| ||||| || || | || || |||||||| || |||||
Sbjct 320 TCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCATCCTCGAGCTGCTTCCCAGCAAAG 261
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| ||||||||| | |||| | |||||||||| ||||| ||| | | |
Sbjct 260 ATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCTTGACATTA 201
Query 35666 GCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722
| | ||||| ||| ||| ||||| | ||||| || || || |||||||| ||
Sbjct 200 TCTATGGTGTCCGAGCT---TTCAACCTCGAGGGTGATGGTCTTCCCTGTCAAAGTCTTG 144
Query 35723 ACAAATATCTGCATTC 35738
|| |||||||||||||
Sbjct 143 ACGAATATCTGCATTC 128
>seq22012
Length=9549
Score = 125 bits (138), Expect = 6e-24
Identities = 146/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| |||||||||||||| ||||| || || | || || ||||||||||| |||||
Sbjct 5877 TCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCATCCTCGAGCTGCTTACCAGCAAAG 5936
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| ||||||||| | |||| | |||||||||| ||||| ||| | | |
Sbjct 5937 ATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCTTGACATTA 5996
Query 35666 GCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722
| | ||||| ||| ||| ||||| | ||||| || || || || ||||| ||
Sbjct 5997 TCTATGGTGTCCGAGCT---TTCAACCTCGAGGGTGATAGTCTTCCCTGTTAAAGTCTTA 6053
Query 35723 ACAAATATCTGCATTC 35738
|| |||||||||||||
Sbjct 6054 ACGAATATCTGCATTC 6069
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | |||||| | || | ||| |||||| ||||||||||||||||
Sbjct 6067 TTCCACCACGAAGACGCAACACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCGG 6126
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622
| || || || | || || || |||||||| ||||| |||| || || |||||
Sbjct 6127 CTAATGTACGGCCATCCTCGAGTTGCTTACCAGCAAAGATCAGCCTTTGTTGGTC 6181
>seq9434
Length=50679
Score = 109 bits (120), Expect = 5e-19
Identities = 144/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||| ||||| || | || || | || ||||| ||||| || |||||
Sbjct 44746 CTCCTTCTGAATGTTATAATCAGCTAGAGTGCGGCCATCCTCCAGTTGCTTTCCAGCAAA 44805
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663
|||| ||||||||||| | ||||| | ||||||||| ||| ||| | ||| | |
Sbjct 44806 GATCAGACGCTGCTGGTCAGGAGGAATCCCTTCCTTGTCC-TGAATTTTAGCCTTAACAT 44864
Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
| | | || || ||| ||| ||||||| ||||| ||||| || ||||| || |
Sbjct 44865 TGTCGATTGTATCAGAGCT---TTCAACCTCCAAGGTGATGGTTTTTCCAGTCAATGTCT 44921
Query 35721 TCACAAATATCTGCAT 35736
|||||||||| |||||
Sbjct 44922 TCACAAATATTTGCAT 44937
Score = 100 bits (110), Expect = 3e-16
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| | | | |||||| || | || ||||||||||||||| || || |
Sbjct 45165 TTCCTCCACGGAGACGAAGCACCAAGTGAAGTGTCGACTCCTTTTGAATGTTATAGTCTG 45224
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || | | || || |||||||| || ||||| ||||||| ||| ||||| | |
Sbjct 45225 CTAATGTCCTTCCATCTTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCTGGTG 45284
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684
||| | |||||| ||| ||||| ||| | | | | | ||||| |||| |
Sbjct 45285 GAATTCCCTCCTTATCCTGAATCTTCGCCTTTACATTGTCAATGGTGTCCGAGCTC---T 45341
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| |||| ||||| || || || |||| || || ||||| ||||||||
Sbjct 45342 CCACTTCCAAAGTGATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 45393
>seq10588
Length=20159
Score = 104 bits (114), Expect = 2e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || || |||||||| || | ||||| | || || |||||||| || |||||
Sbjct 1288 CTCCTTCTGGATATTGTAATCAGCTAGGGTTCTTCCATCCTCGAGCTGCTTTCCAGCAAA 1347
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||||| |||| | |||||||||| |||||| ||||| ||
Sbjct 1348 GATAAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 1406
Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
|| | | ||||| |||| || ||||||| ||||| || || || || | || |
Sbjct 1407 TGTCGATGGTGTCGGAGCTC---TCAACCTCCAAGGTGATAGTCTTTCCAGTGAGCGTCT 1463
Query 35721 TCACAAATATCTGCAT 35736
| ||||| ||||||||
Sbjct 1464 TGACAAAGATCTGCAT 1479
>seq87
Length=177581
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||||||||| ||||| ||||| || | | || || |||||||| || |||||
Sbjct 54702 CTCCTTTTGAATGTTATAATCTGCCAATGTCCTTCCATCTTCAAGCTGCTTCCCTGCAAA 54761
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| |||||| || | |||| | ||| || ||| ||||| ||||| | |
Sbjct 54762 AATCAACCTCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTCGCCTTCACATT 54821
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| |||| ||||| |||| || || || || || |||| || ||
Sbjct 54822 GTCAATTGTGTCCGAGCTC---TCCACTTCCAATGTAATGGTCTTTCCGGTCAGGGTCTT 54878
Query 35722 CACAAATATCTGCAT 35736
||| || ||||||||
Sbjct 54879 CACGAAAATCTGCAT 54893
>seq4209
Length=73032
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/200 (71%), Gaps = 7/200 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || || | ||||| | || || |||||||| ||||||||
Sbjct 42 CTCCTTCTGGATGTTATAGTCAGCAAGGGTTCTACCATCCTCGAGCTGCTTGCCCGCAAA 101
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | || | | |||||||| |||||| ||| | | |
Sbjct 102 GATGAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 161
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| |||| || ||||| | || || || || || ||||| |||||
Sbjct 162 GTCTATGGTGTCTGAGCTC---TCAACCTCTAGGGTTATGGTCTTTCCGGTCAATGTTTT 218
Query 35722 CACAAATATCTGCATTCTGT 35741
|||||| ||||||| |||||
Sbjct 219 CACAAAGATCTGCA-TCTGT 237
>seq1982
Length=56187
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639
|||| || |||||||| || || || || | ||||||||||||| || | | |||||
Sbjct 21938 CGTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCT 21879
Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699
||||| ||||| ||||| | | | | |||||| || || ||||| | || |
Sbjct 21878 TGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTA 21819
Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || ||||| || |||||||| || ||||||||
Sbjct 21818 TCGTCTTCCCCGTTAAGGTTTTCACGAAGATCTGCAT 21782
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639
|||| || |||||||| || || || || | ||||||||||||| || | | |||||
Sbjct 32275 CGTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCT 32216
Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699
||||| |||||| ||||| | | | | |||||| || || ||||| | || |
Sbjct 32215 TGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTTA 32156
Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || ||||| | |||||||| || ||||||||
Sbjct 32155 TCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 32119
>seq1077
Length=76872
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/229 (69%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| ||| | ||| |||||| |||| |||||| |||||
Sbjct 52849 CCACCACGAAGACGGATCACCAGATGAATCGTCGACTCCTTCTGAACGTTGTAGTCGGCG 52790
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || ||| || ||||| || || || |||| | || |||||||||| ||
Sbjct 52789 AGCGTACG---GTCTTCAAGCTGTTTTCCAGCGTATATTATCCTCTGCTGGTCCAGTGGG 52733
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC- 35688
|||| ||||||||| ||||| ||||| | | | |||||| || || ||
Sbjct 52732 ACGCCTTCCTTGTCCTGTATCTTAGCCTTCACATTGTAAATGGTGTCGGAAGACTCGACT 52673
Query 35689 -CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||| ||| | || ||||| | || |||| |||||||||||
Sbjct 52672 CCTCTAGCGTTATCATCTTCCCCGTTAGTGTCCTCACGAATATCTGCAT 52624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448609538817520
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