Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 329 4e-85
seq8546 232 7e-56
seq25216 170 2e-37
seq29420 163 3e-35
seq59 152 6e-32
seq2610 113 5e-20
seq8630 102 9e-17
seq78858 89.7 6e-13
seq4835 82.4 8e-11
>seq5412
Length=31808
Score = 329 bits (364), Expect = 4e-85
Identities = 490/693 (71%), Gaps = 8/693 (1%)
Strand=Plus/Minus
Query 160006 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCC 160064
|||| ||||| |||||||||| || | ||| | ||||| ||| || || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 160065 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 160124
||| | |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 160125 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTT 160184
| || || ||||| || ||||||||||| || ||| ||| || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 160185 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 160244
||||| ||||| || |||||||| ||||| ||||||| ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 160245 TTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGG 160304
| | || | || ||||||||| | | || | | || ||||| |||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 160305 GAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTC 160364
|||||| | |||| | ||||||||||| ||||| ||| || ||||| || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 160365 GCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCT 160424
|| | || ||||||| ||| | | || || | ||| |||| || || ||| |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 160425 ATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAAT 160484
|||||||| || || ||||||||||| |||| |||| |||||||||| || || |||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 160485 ATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTC 160544
||||||||||| || || |||||| | ||||| ||||| ||||||| || | | |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 160545 TCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAG 160604
| ||| || | | || || || | | | ||||| || |||| ||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 160605 TCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCC 160664
|| || | ||||| | | | ||||||||||||||||| || || ||||| || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 160665 CATGGTTACTTCGGTCGTTTGATCTTCCAATAT 160697
|||||||| || || || || ||||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
Score = 102 bits (112), Expect = 9e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 160810 TCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACG 160869
|||| |||||||| || | | ||| |||||||||||||| | || || ||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 160870 TACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 160929
| | || || || ||||||||||||||||||||||| ||||| || | |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 160930 CACTCGACCTCGCTGC 160945
| |||||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 232 bits (256), Expect = 7e-56
Identities = 320/445 (72%), Gaps = 6/445 (1%)
Strand=Plus/Minus
Query 160503 CACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGT 160562
|||||| | ||||| ||||| |||||||| || || | ||| || |||||| || |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 160563 CTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTA 160621
| || || || | | | || | ||||| || |||| | || || | |||||
Sbjct 13144 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTA 13086
Query 160622 TAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCG 160681
| || ||||||||||| || || | || || || || || |||||||| || || ||
Sbjct 13085 CAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCG 13026
Query 160682 TTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGC 160741
|| |||||||||||||| |||||| | || | ||| | || |||||| | | ||
Sbjct 13025 ATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGC 12966
Query 160742 ATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCT 160801
||||||||||| || || ||||| ||| || | ||| |||| || |||||||| | |||
Sbjct 12965 TTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCT 12906
Query 160802 CAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTG 160861
||||| ||||| |||||||| || | | ||| |||||||||||||| | | ||
Sbjct 12905 AAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA----TTG 12850
Query 160862 GGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACA 160921
||| || | | || || ||| ||||||||||||||||||||||| ||||| || ||
Sbjct 12849 GGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 12790
Query 160922 CAACTTCCCACTCGACCTCGCTGCT 160946
||||||| || ||||| ||||||
Sbjct 12789 TAACTTCCATCTAGACCTAGCTGCT 12765
>seq25216
Length=8180
Score = 170 bits (188), Expect = 2e-37
Identities = 181/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 160320 TTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCT 160379
|| ||||||||||| ||||| | | || ||||| ||||| || || || || |||||
Sbjct 7256 TTTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCT 7197
Query 160380 GTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 160439
|| ||| | | || || | |||||||| || || |||| ||||||||| || ||
Sbjct 7196 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 7137
Query 160440 TCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 160499
||||||||||| |||| |||| |||||||||| | || ||||| ||||||||||| ||
Sbjct 7136 TCTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCA 7077
Query 160500 TTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558
|| |||||| | ||||| | ||| |||||||| || || | ||| ||||||||| ||
Sbjct 7076 TTTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 7018
>seq29420
Length=7120
Score = 163 bits (180), Expect = 3e-35
Identities = 252/360 (70%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 160073 TGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGG 160132
|||||| || || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 160133 TAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTA 160192
||||| || |||||||||| || |||| |||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 160193 TCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACT 160252
||| || |||||||| ||||| ||||||| ||| | || || |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 160253 CGTAGTATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTC 160312
|| || |||||| | | || | | || ||||| |||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 160313 ATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGC 160372
| |||| | ||||||||||| ||||| ||| || ||||| | ||| || || || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 160373 ATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCT 160432
|| || | ||| | | || || | |||||||| || || |||| |||||||||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq59
Length=339703
Score = 152 bits (168), Expect = 6e-32
Identities = 189/259 (73%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 160413 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAA 160472
|| || |||| ||||||||| || | ||||||||||| |||| |||| ||||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 160473 GCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGT 160532
|| || ||||| ||||||||||| || || |||||| | |||| ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 160533 GGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACG 160592
|| || | ||| || |||||| || | | || || || | || | |||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 160593 ACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAAC 160652
|| |||| || || || | ||||| | ||| ||||||||||||||||| || ||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 160653 ATCGTCGCAGCCCATGGTT 160671
|| || || | |||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq2610
Length=55653
Score = 113 bits (124), Expect = 5e-20
Identities = 163/225 (72%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
||||| || || |||| || | || || | ||| || || || || || ||||||
Sbjct 39278 TACATCTTGGACTCAGCTGAGAATGCTGGCTTGGATCTTCCATACTCGTGCCGAGCTGGT 39337
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
||||| || ||||||| || || | ||||| || |||| |||||||| ||| ||||
Sbjct 39338 GCTTGTTCAACCTGTGCTGGGAAGCTGATTTCTGGATCAGTCGACCAGTCAGACGGGTCC 39397
Query 161246 TTCTTGGATGATGACCAGATTGAATC-TGGATTCCTTTTGACATGTGTTGCATATCCTAC 161304
||| | ||||||||||| ||| |||| || | | | |||| || || || || |||||
Sbjct 39398 TTCCTTGATGATGACCAAATT-AATCAGGGCTACGTACTGACTTGCGTCGCGTACCCTAC 39456
Query 161305 TAGCGATTGTGTGATTCAAACTGAGCAAG-AGGAGAATCTGTACT 161348
| |||||||||||||| ||| | ||| ||| ||| || ||||
Sbjct 39457 CGGAGATTGTGTGATTCATACTCACAAAGAAGGTGAA-CTCTACT 39500
>seq8630
Length=23577
Score = 102 bits (112), Expect = 9e-17
Identities = 103/133 (77%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGT-CGCAGCCCATGGTTACTT 160675
||||| || || ||||||||||| || || || || ||||| ||| || |||||||| ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 160676 CGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCT 160735
||||| || |||||||||||||| |||||||| || ||||| | || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 160736 GGCAGCATGGCCT 160748
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq78858
Length=18568
Score = 89.7 bits (98), Expect = 6e-13
Identities = 131/182 (72%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| |||||||||||||| || | ||| ||
Sbjct 917 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGG-TTGTCCGGT 975
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | ||| | || |||||| |||| || |||| ||
Sbjct 976 CTATTGCTCTTTCCGTGTGCGTATTTCGCTGTAGGAGGTTGGTTTACGGGTTCAACCTTT 1035
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 161866
| ||| ||||||||| |||||| | || ||||||||| | | ||| ||||| |||||
Sbjct 1036 GTAACTTCCTGGTATACTCATGGTTTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 1093
Query 161867 TA 161868
||
Sbjct 1094 TA 1095
>seq4835
Length=43218
Score = 82.4 bits (90), Expect = 8e-11
Identities = 100/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676
||||| | || ||||||||||| || || || || ||||| || || |||||||| ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTC----ACTTCACTTCTT 160732
|| | || |||||||||||||| |||||||| || ||||| | | || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 160733 CCTGGCAGCATGGCCT 160748
| || || ||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556793245082800
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