Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 295 1e-74
seq8546 192 9e-44
seq29420 147 3e-30
seq25216 125 1e-23
seq2357 116 5e-21
seq59 113 7e-20
seq3927 111 2e-19
seq6909 104 3e-17
seq8630 95.1 2e-14
>seq5412
Length=31808
Score = 295 bits (326), Expect = 1e-74
Identities = 482/692 (70%), Gaps = 8/692 (1%)
Strand=Plus/Minus
Query 174514 GGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACTGTATGT-TTCATTATCGCT 174572
|||| || ||| | ||||||||||| || || ||||||| | || || ||||| ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAACA-TCCGTATTTATTATAGCC 15225
Query 174573 TTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTC 174632
||| | | |||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 174633 ATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTA 174692
| || |||||||| || ||||||||||| || ||| | || || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 174693 CACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCT 174752
||||| || ||||| |||||||| || | | || |||||| | ||||| ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 174753 TTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGG 174812
| | ||| |||| || |||||| | ||||| | || ||||| |||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 174813 GAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTT 174872
||||| || ||| | |||||| | |||||||| ||| || || || || || |||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 174873 GCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCG 174932
|| | ||| | || || ||| | |||| || | ||| |||| || || | |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 174933 ATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAAC 174992
||||| | || || ||||| || ||||||| |||| | || ||||| || || || |||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 174993 ATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTC 175052
||| | |||||||| || |||||||| || || || ||||| |||| || | | |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 175053 TCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAG 175112
| ||||||||| | || ||||| | || | || || || |||| |||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 175113 TCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCC 175172
|| || | ||||||| | | || ||||| |||||||| ||||| ||||| || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 175173 CATGGCTACTTCGGTCGTTTGATCTTCCAATA 175204
||||| || || || || || |||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
>seq8546
Length=31398
Score = 192 bits (212), Expect = 9e-44
Identities = 303/434 (70%), Gaps = 4/434 (1%)
Strand=Plus/Minus
Query 175011 CACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCA 175070
|||||||| || || || ||||| ||||| || || | ||| | |||||||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 175071 CTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTAC 175130
| || |||||| | || | || || || |||| | | || || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 175131 AAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGT 175190
| || || ||||| || || || | || || || || || ||||| || || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 175191 TTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCA 175250
|| ||||||||||| ||| |||||| | || | || | || |||||||||| ||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 175251 TGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTC 175310
||||| || || ||||| ||||| || | | ||| || || |||||||| | |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 175311 AATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGG 175370
|| || ||||| |||||||| ||||| | || | |||||| | ||| | | |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA----TTGG 12849
Query 175371 GCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACAC 175430
|| ||| || ||||| | ||| ||||| |||||||| |||||||| | ||||| ||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 175431 AACTTCCCACTAGA 175444
||||||| |||||
Sbjct 12788 AACTTCCATCTAGA 12775
>seq29420
Length=7120
Score = 147 bits (162), Expect = 3e-30
Identities = 234/336 (70%), Gaps = 0/336 (0%)
Strand=Plus/Plus
Query 174581 TGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGG 174640
|||||| || || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 174641 AAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTA 174700
|||||| || |||||||||| || |||| | ||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 174701 CCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACT 174760
||||| |||||||| || | | || |||||| | ||||| |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 174761 AGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTC 174820
| ||| || |||||| | ||||| | || ||||| ||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 174821 TTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGC 174880
|| ||| | |||||| | |||||||| ||| || || || | || ||||| || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 174881 TTCAGCAGTATTCCTAGTCTATCCTTTCGGTCAAGG 174916
| | | | ||| | |||| || | ||||||||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGG 3750
>seq25216
Length=8180
Score = 125 bits (138), Expect = 1e-23
Identities = 180/254 (71%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 174828 TTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCA 174887
|| |||||| | |||||||| | | || || || || || ||||| || ||| | ||
Sbjct 7256 TTTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCT 7197
Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947
|| ||| | |||| || | |||||||| || || || | ||||| | || ||
Sbjct 7196 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 7137
Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007
||||| || ||||||| |||| | || ||||| | || || |||||| | ||||||||
Sbjct 7136 TCTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCA 7077
Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067
|| |||||||| || || | ||||| ||||| || || | ||| || |||||||||
Sbjct 7076 TTTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 7017
Query 175068 TCACTTGTTACCTC 175081
|| | || |||||
Sbjct 7016 TCTTTGGTAACCTC 7003
>seq2357
Length=57658
Score = 116 bits (128), Expect = 5e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 161473 TGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532
||||||||| |||||||||||||| || ||| |||| |||| || || ||||| |||||
Sbjct 45931 TGGTATTCTGTTCAACCATGAGTCTCCTCGAAGGGGAGAGAACTTTGTGACCCGAAAGAT 45990
Query 161533 TACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCT 161592
|| || | | || | | || | || || || ||| | || | ||| || || ||
Sbjct 45991 CACGAGAGCAGTAGGCAGGATCAAGACCGGTCTGCAGAACAAGCTCTTCCTTGGAAACCT 46050
Query 161593 AAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTT 161652
| | | | |||||||| ||| | ||||||||||||||| |||||| ||||| |
Sbjct 46051 TCAGGCTTCAAGGGATTGGGGATTTGCAGGAGACTATGTGGAGGCAATGTGGATGATGCT 46110
Query 161653 ACAACAGGAAACTCCTGATGACTATGT 161679
|||||||| | || |||||||||||
Sbjct 46111 TCAACAGGACAAGCCAGATGACTATGT 46137
>seq59
Length=339703
Score = 113 bits (124), Expect = 7e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007
||||| || ||||||| |||| | || ||||| || || || |||||| | ||||||||
Sbjct 52336 TCTGGTACTTTCAACTTCATGATTGTATTCCATGCTGAGCACAACATCCTTATGCACCCA 52395
Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067
|| |||||||| | || || ||||| ||||| || || | ||| | |||||||||
Sbjct 52396 TTTCACATGTTAAGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGT 52455
Query 175068 TCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGT 175127
|| | || ||||| | | | || || || |||| ||| || || | |||
Sbjct 52456 TCTTTGGTAACCTCGAGTTTGATTAGGGAAACCACAGAAAATGAATCTACTAATGAAGGT 52515
Query 175128 TACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGG 175177
|||| ||| || ||||| |||||||| ||||| || || || | |||||
Sbjct 52516 TACAGGTTTGGTCAAGAGGAAGAGACTTATAATATTGTAGCTACTCATGG 52565
>seq3927
Length=49767
Score = 111 bits (122), Expect = 2e-19
Identities = 176/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Plus
Query 176139 TGGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTT 176198
||| | |||||||||||||| || || || | || || || || ||| | ||||| |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 176199 GAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATC 176258
||||| || || || | || || || || || || ||||| |||||| ||
Sbjct 26067 GAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAATT 26126
Query 176259 GCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCC 176318
|| | ||||| |||||||| | || ||||||||||| ||| |||||||||||
Sbjct 26127 GCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCG 26186
Query 176319 CCCTCCTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAAC 176378
|| |||||||| ||| | || || ||||| | | ||| |||| || || || ||
Sbjct 26187 CCTAGTTTTGGTGTAGCATCTAT-ATTCGATTCATCCTCTTTTTTCAAGGGTTTCATAAT 26245
Query 176379 TGGACACTGAA 176389
|||||| ||||
Sbjct 26246 TGGACATTGAA 26256
>seq6909
Length=27413
Score = 104 bits (114), Expect = 3e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 161473 TGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532
||| ||||| |||||||| ||||| || ||| |||| |||| || || ||||| |||||
Sbjct 25572 TGGCATTCTGTTCAACCACGAGTCTCCTCGAAGGGGAGAGAACTTTGTGACCCGAAAGAT 25631
Query 161533 TACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCT 161592
|| || | | || | | || | || || |||||| || | ||| || || ||
Sbjct 25632 CACAAGAGCAGTAGGCAGGATCAAGACCGGTCTACAGACCAAGCTCTTCCTCGGAAACCT 25691
Query 161593 AAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTT 161652
| | | | ||||||||| ||| | ||||||||| ||||| |||||| ||||| |
Sbjct 25692 TCAGGCTTCAAGGGATTGGGGTTTTGCAGGAGACTATGTTGAGGCAATGTGGATGATGCT 25751
Query 161653 ACAACAGGAAACTCCTGATGACTATGT 161679
||||| || | || |||||||||||
Sbjct 25752 TCAACAAGACAAGCCAGATGACTATGT 25778
>seq8630
Length=23577
Score = 95.1 bits (104), Expect = 2e-14
Identities = 101/132 (77%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 175125 GGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTG-GCAGCCCATGGCTACTT 175183
|||||||| || || ||||| || || || || || ||||| || || ||||| || ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 175184 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTT 175243
||||| || ||||||||||| ||| |||||||| || || || | || ||||| ||
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 175244 AGCCGCATGGCC 175255
|||||| |||||
Sbjct 7617 AGCCGCTTGGCC 7628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 726393145832720
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