Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 351 1e-91
seq8546 185 1e-41
seq25216 183 4e-41
seq29420 167 3e-36
seq59 167 3e-36
seq3927 102 1e-16
seq8630 87.8 2e-12
>seq5412
Length=31808
Score = 351 bits (388), Expect = 1e-91
Identities = 495/693 (71%), Gaps = 8/693 (1%)
Strand=Plus/Minus
Query 177895 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCC 177953
|||| ||||| |||||||||| || | ||| | ||||| ||| || || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 177954 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 178013
||| | |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 178014 ATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTT 178073
| || || ||||| || ||||||||||| || ||| ||| || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 178074 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 178133
||||| ||||| || |||||||| ||||| ||||||| ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 178134 TTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGG 178193
| | || | || ||||||||| | ||||| | | |||||||| |||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 178194 GAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTA 178253
|||||| | |||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 178254 GCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCA 178313
|| | || | || || ||| || |||| || | ||| |||| |||||| | |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 178314 ATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAAC 178373
||||| || || || |||||||| ||||||| |||| |||| ||||| || || ||||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 178374 ATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTC 178433
|| || |||||||| || |||||||| || || || |||||||||| || | || |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 178434 AGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAA 178493
|| ||| ||||||||||| || || | | | ||||| || |||| |||
Sbjct 14744 AG------GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 178494 TCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCA 178553
|| || | ||||| | | | || ||||| |||||||| || || ||||| || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 178554 CATGGCTACTTCGGTCGTTTGATCTTCCAATAT 178586
||||| || || || || || ||||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
>seq8546
Length=31398
Score = 185 bits (204), Expect = 1e-41
Identities = 307/443 (69%), Gaps = 4/443 (1%)
Strand=Plus/Minus
Query 178392 CACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCT 178451
|||||||| || || || ||||||||||| || || | ||||||| ||||| ||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 178452 TTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTAT 178511
||||| || ||| | | | ||||| || |||| |||| || | |||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 178512 AAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGT 178571
| || || ||||| || || || | || || || || || ||||| || || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 178572 TTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCA 178631
|| ||||||||||||||| |||||| | || | ||| | || |||||| | | ||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 178632 TGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTC 178691
||||||||||| || || ||||| || | | || | || || |||||||||| |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 178692 AATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGG 178751
|| || ||||| |||||||| || | | || | ||||| ||||| || |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 178752 GCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCAC 178811
|| || | | ||||| || || || |||||||| ||||| || || || || ||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 178812 AACTTCCCGCTTGATCTTGCAGC 178834
||||||| || || || || ||
Sbjct 12788 AACTTCCATCTAGACCTAGCTGC 12766
>seq25216
Length=8180
Score = 183 bits (202), Expect = 4e-41
Identities = 193/254 (76%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 178209 TTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCA 178268
|| ||||||||||| ||||| | | || || || ||||| || || || || | ||
Sbjct 7256 TTTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCT 7197
Query 178269 GTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATC 178328
|| ||| || |||| || | |||||||| |||||||| | ||||| || || ||
Sbjct 7196 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 7137
Query 178329 TCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCC 178388
|||||||| ||||||| |||| |||| ||||| | || |||||||| || ||||||||
Sbjct 7136 TCTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCA 7077
Query 178389 TTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGT 178448
|| |||||||| || || | ||||||||||| || || || |||||||| ||||| |||
Sbjct 7076 TTTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 7017
Query 178449 TCTTTGGTTACATC 178462
|||||||| || ||
Sbjct 7016 TCTTTGGTAACCTC 7003
>seq29420
Length=7120
Score = 167 bits (184), Expect = 3e-36
Identities = 253/360 (70%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 177962 TGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGG 178021
|||||| || || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 178022 CAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTA 178081
||||| || |||||||||| || |||| |||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 178082 TCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACT 178141
||| || |||||||| ||||| ||||||| ||| | || || |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 178142 CGTAGTATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTC 178201
|| || |||||| | ||||| | | |||||||| |||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 178202 ATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGC 178261
| |||| | ||||||||||| ||||| ||| || || || | ||| || || || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 178262 ATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACT 178321
| | | ||| || |||| || | |||||||| |||||||| | ||||| ||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq59
Length=339703
Score = 167 bits (184), Expect = 3e-36
Identities = 191/257 (74%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 178302 TTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAA 178361
|||||||| | ||||| || || | |||||||| ||||||| |||| |||| |||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 178362 GCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGT 178421
|| || |||||||| || |||||||| || |||||||| | || || |||||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 178422 GGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACG 178481
|| || || ||||||| ||||| ||||||||||| || || | || | |||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 178482 ACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAAC 178541
|| |||| ||||| || | ||||| | ||| || ||||| |||||||| || ||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 178542 ATCGTTGCAGCACATGG 178558
|| || || | |||||
Sbjct 52549 ATTGTAGCTACTCATGG 52565
>seq3927
Length=49767
Score = 102 bits (112), Expect = 1e-16
Identities = 175/248 (71%), Gaps = 7/248 (3%)
Strand=Plus/Plus
Query 179511 TGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTT 179570
|||| ||| || |||||||| || || || | || || ||||| ||| | | ||||||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 179571 GAACTTGCTCG-CCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTAT 179629
||||||||||| ||| || | ||||||| ||||| || || || | |||||| ||
Sbjct 26067 GAACTTGCTCGATCTG-TTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAAT 26125
Query 179630 TGCTGTATTCG--TCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTC 179687
||| | || | || |||||| || || ||||| | || ||||| |||||| ||
Sbjct 26126 TGCCATTTTTGTTTCGGTGTTT--CTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTT 26183
Query 179688 GCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCAC 179747
||||| |||||||| || | || ||| | ||| | || || |||| || || ||
Sbjct 26184 GCGCCTAGTTTTGGTGTAGCATCTATATTC-GATTCATCCTCTTTTTTCAAGGGTTTCAT 26242
Query 179748 AACTGGAC 179755
|| |||||
Sbjct 26243 AATTGGAC 26250
>seq8630
Length=23577
Score = 87.8 bits (96), Expect = 2e-12
Identities = 100/133 (75%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 178506 GGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTT-GCAGCACATGGCTACTT 178564
||||| || || || ||||| || || || || || ||||| || || ||||| || ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 178565 CGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCT 178624
||||| || ||||||||||||||| |||||||| || ||||| | || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 178625 CGCAGCATGGCCT 178637
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603073528938720
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