Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 327 1e-84
seq8546 205 1e-47
seq25216 179 4e-40
seq59 161 1e-34
seq29420 149 7e-31
seq8630 111 2e-19
seq4835 87.8 2e-12
seq78858 84.2 2e-11
>seq5412
Length=31808
Score = 327 bits (362), Expect = 1e-84
Identities = 489/692 (71%), Gaps = 8/692 (1%)
Strand=Plus/Minus
Query 158425 GGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCC 158483
|||| ||||| |||||||||| || | ||| | ||||| ||| || || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 158484 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 158543
||| | |||||||| || || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 158544 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTT 158603
| || || ||||| || ||||||||||| || | | ||| || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 158604 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 158663
||||| ||||| || |||||||| ||||| ||||||| ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 158664 TTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGG 158723
| | || | || ||||||||| | | || | | || ||||| ||||| |||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 158724 GAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTC 158783
|||||| | ||| | ||||||||||| ||||| ||| || ||||| || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 158784 GCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCT 158843
|| | || ||||||| ||| | |||| || | ||| |||| || || ||| |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 158844 ATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAAC 158903
|||||||| || || ||||||||||| |||| |||| |||||||||| || || ||||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 158904 ATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTC 158963
|||||||||||||| || || ||| | || || ||||| ||||||| || | || |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 158964 TCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAG 159023
| |||||| | | || || || | | | ||||| || |||| ||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 159024 TCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCC 159083
|| || | ||||||| | | || ||||| ||||| || ||||||||||| || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 159084 CATGGTTACTTCGGTCGTTTGATCTTCCAATA 159115
|||||||| || || || || |||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
Score = 96.9 bits (106), Expect = 4e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 159229 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 159288
|||| |||||||| || | ||||| |||| |||||||| | || || ||||| |||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 159289 TACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 159348
| | ||||| | || |||||||||||||||||||| ||||| || | |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 159349 CACTCGACCTTGCTGC 159364
| |||||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 205 bits (226), Expect = 1e-47
Identities = 314/445 (71%), Gaps = 6/445 (1%)
Strand=Plus/Minus
Query 158922 CATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT 158981
|| ||| | || || ||||| |||||||| || || | ||| || ||||||||| |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 158982 CTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTA 159040
| || || || | | | || | ||||| || |||| | || || | |||||
Sbjct 13144 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTA 13086
Query 159041 CAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCG 159100
|| || || ||||| || ||||| | ||||| || || || |||||||| || || ||
Sbjct 13085 CAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCG 13026
Query 159101 TTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGC 159160
|| ||||||||||| ||| |||||| | || | ||| || || |||||| | | |||
Sbjct 13025 ATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGC 12966
Query 159161 ATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCT 159220
|||||||| || || || ||||| || | | || | || |||||||| | |||
Sbjct 12965 TTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCT 12906
Query 159221 GAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTG 159280
||||| ||||| |||||||| || | ||||| |||| |||||||| || ||
Sbjct 12905 AAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTG 12850
Query 159281 GGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACA 159340
||| ||| | | ||||| || || |||||||||||||||||||| ||||| || ||
Sbjct 12849 GGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 12790
Query 159341 CAACTTCCCACTCGACCTTGCTGCT 159365
||||||| || ||||| ||||||
Sbjct 12789 TAACTTCCATCTAGACCTAGCTGCT 12765
>seq25216
Length=8180
Score = 179 bits (198), Expect = 4e-40
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 158739 TTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGCT 158798
|| ||||||||||| ||||| | | || ||||| || || || || || || |||||
Sbjct 7256 TTTGGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCT 7197
Query 158799 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 158858
|| ||| | |||| || | |||||||| || || |||| ||||||||| || ||
Sbjct 7196 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 7137
Query 158859 TCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCG 158918
||||||||||| |||| |||| |||||||||| | || ||||||||||||||||||||
Sbjct 7136 TCTGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCA 7077
Query 158919 TTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158977
|| || ||| | || || | ||| |||||||| || || || ||| ||||||||||||
Sbjct 7076 TTTCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 7018
>seq59
Length=339703
Score = 161 bits (178), Expect = 1e-34
Identities = 191/259 (74%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 158832 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAA 158891
|| || |||| ||||||||| || | ||||||||||| |||| |||| ||||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 158892 GCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGT 158951
|| || |||||||||||||||||||| || || ||| | | || ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 158952 GGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACG 159011
|| || || ||| || ||||||||| | | || || || | || | |||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 159012 ACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAAT 159071
|| |||| || || || | ||||||| ||| || ||||| ||||| || ||||||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 159072 ATCGTCGCAGCCCATGGTT 159090
|| || || | |||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq29420
Length=7120
Score = 149 bits (164), Expect = 7e-31
Identities = 249/360 (69%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 158492 TGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGG 158551
|||||| || || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 158552 TAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTA 158611
||||| || |||||||||| || | || |||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 158612 TCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACT 158671
||| || |||||||| ||||| ||||||| ||| | || || |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 158672 CGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTC 158731
|| || |||||| | | || | | || ||||| ||||| |||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 158732 ATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGC 158791
| ||| | ||||||||||| ||||| ||| || ||||| | || || || || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 158792 ATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCT 158851
|| || | ||| | |||| || | |||||||| || || |||| |||||||||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq8630
Length=23577
Score = 111 bits (122), Expect = 2e-19
Identities = 105/133 (79%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGT-CGCAGCCCATGGTTACTT 159094
|||||||| || || ||||| || ||||| || |||||||| ||| || |||||||| ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 159095 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 159154
||||| || ||||||||||| ||| |||||||| || ||||| || || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 159155 TGCTGCATGGCCT 159167
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq4835
Length=43218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095
||||||| || || ||||| || ||||| || |||||||| || || |||||||| ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTC----CTTGCACTTCTT 159151
|| | || ||||||||||| ||| |||||||| || ||||| || || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 159152 CCTTGCTGCATGGCCT 159167
| || || ||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
>seq78858
Length=18568
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/182 (71%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958
||||| || | || |||||| | |||| |||||||||||||| || | ||| ||
Sbjct 917 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGG-TTGTCCGGT 975
Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018
|| | || |||| ||| ||| | ||| | || |||||| |||| || |||| ||
Sbjct 976 CTATTGCTCTTTCCGTGTGCGTATTTCGCTGTAGGAGGTTGGTTTACGGGTTCAACCTTT 1035
Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 160077
| ||| ||||||||| ||||| | || ||||||||| | | ||| ||||| |||||
Sbjct 1036 GTAACTTCCTGGTATACTCATGGTTTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 1093
Query 160078 TA 160079
||
Sbjct 1094 TA 1095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549796906843520
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