Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 324 2e-83
seq25216 174 2e-38
seq8546 172 7e-38
seq29420 170 2e-37
seq59 152 6e-32
seq3927 145 9e-30
seq8630 86.0 8e-12
>seq5412
Length=31808
Score = 324 bits (358), Expect = 2e-83
Identities = 491/694 (71%), Gaps = 10/694 (1%)
Strand=Plus/Minus
Query 178907 GGTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCT 178965
|||| || || ||||||||||||| || | | ||||| ||| || || || | ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 178966 TTCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 179025
||| | || || ||||| || |||||||| || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 179026 ATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTA 179085
| || |||||||| || ||||||||||| || | | | || || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 179086 CACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCT 179145
||||| || || || |||||||| ||||| | ||||| ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 179146 TTCCAACTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGG 179205
| | || | || || |||||| | | || | | || ||||| |||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 179206 GAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTC 179265
|||||| || |||||| |||||||| || ||||| |||||| || || || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 179266 GCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCT 179325
|| |||| | ||| || ||| | |||| || | ||| |||| || ||| ||| |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 179326 ATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAAC 179385
|||||||| || || ||||||||||| |||| |||| |||||||||| || || ||||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 179386 ATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTC 179445
|||||||||||||| || || ||| | || || ||||| ||||||| || | || |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 179446 TCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGA 179504
| ||| || | | || || | | | ||| || | ||||| || || | ||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCT-CGAGTTTGATCAGGGAAACCACAGAAAATGA 14692
Query 179505 GTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGC 179564
|| || | ||||| | | | || ||||| |||||||| ||||| ||||| || ||
Sbjct 14691 ATCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGC 14632
Query 179565 ACATGGCTACTTCGGTCGTTTGATCTTCCAATAT 179598
||||| || || || || || ||||||||||||
Sbjct 14631 TCATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 179711 TCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACG 179770
|||| |||||||| || | |||| ||||||| ||||| |||| || ||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 179771 TATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 179830
| | ||||| | | |||||||||||||||||||| ||||| || | |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 179831 CACTCGACCTTGCTGC 179846
| |||||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq25216
Length=8180
Score = 174 bits (192), Expect = 2e-38
Identities = 180/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 179224 GGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTA 179283
|||||||| || ||||| | |||| || || || || || || ||||| | ||| ||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 179284 TTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCT 179343
||| | |||| || | |||||||| || ||||||| ||||||||| || || |||
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 179344 GGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTC 179403
|||||||| |||| |||| |||||||||| | || |||||||||||||||||||| ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 179404 CATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459
|| ||| | || || | ||| |||||||| || || || ||| ||||||||| ||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 7018
>seq8546
Length=31398
Score = 172 bits (190), Expect = 7e-38
Identities = 307/445 (69%), Gaps = 6/445 (1%)
Strand=Plus/Minus
Query 179404 CATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGT 179463
|| ||| | || || ||||| |||||||| || || | ||| || |||||| || |
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 179464 CTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATGGTTA 179522
| || || || | | ||| || | ||||| || || | | || || | |||||
Sbjct 13144 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTA 13086
Query 179523 TAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCG 179582
| || || ||||| || || || | || || || || || ||||| || || || ||
Sbjct 13085 CAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCG 13026
Query 179583 TTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGC 179642
|| |||||||||||||| || ||| | || | ||||| || |||||| | | |||
Sbjct 13025 ATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGC 12966
Query 179643 GTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCT 179702
||||| || || || || ||||| ||| || | || | || ||||| || | |||
Sbjct 12965 TTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCT 12906
Query 179703 CAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATG 179762
||||| ||||| |||||||| || | |||| ||||||| ||||| ||| ||
Sbjct 12905 AAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA----TTG 12850
Query 179763 GGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACA 179822
||| || | | ||||| || | |||||||||||||||||||| ||||| || ||
Sbjct 12849 GGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 12790
Query 179823 CAACTTCCCACTCGACCTTGCTGCT 179847
||||||| || ||||| ||||||
Sbjct 12789 TAACTTCCATCTAGACCTAGCTGCT 12765
>seq29420
Length=7120
Score = 170 bits (188), Expect = 2e-37
Identities = 253/359 (70%), Gaps = 0/359 (0%)
Strand=Plus/Plus
Query 178975 GCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGA 179034
|| ||||| || |||||||| || || |||||||| || |||| || || | | |||
Sbjct 3416 GCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGGA 3475
Query 179035 AACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTAC 179094
||||| || |||||||||| || | || | ||| || || ||| | ||||| ||
Sbjct 3476 AACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTAT 3535
Query 179095 CCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTG 179154
|| || |||||||| ||||| | ||||| ||| | || || |||||||||| | ||
Sbjct 3536 CCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTA 3595
Query 179155 GTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCT 179214
|| || |||||| | | || | | || ||||| ||||||||||||||| |
Sbjct 3596 AATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGT 3655
Query 179215 TACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCG 179274
| |||||| |||||||| || ||||| |||||| || || | || || || |||||
Sbjct 3656 TTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGCT 3715
Query 179275 AGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCT 179333
| | | | ||| | |||| || | |||||||| || ||||||| |||||||||
Sbjct 3716 ACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq59
Length=339703
Score = 152 bits (168), Expect = 6e-32
Identities = 190/258 (74%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 179314 TTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAA 179373
|| ||||||| ||||||||| || | ||||||||||| |||| |||| ||||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 179374 GCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGT 179433
|| || |||||||||||||||||||| || || ||| | | || ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 179434 GGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTG-TTCGTGAAAC 179492
|| || || ||| || |||||| || | | || || | | | ||| || | |||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCT-CGAGTTTGATTAGGGAAAC 52487
Query 179493 AACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAA 179552
|| || | || || || | ||||| | ||| || ||||| |||||||| |||||
Sbjct 52488 CACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAA 52547
Query 179553 CATCGTCGCAGCACATGG 179570
|| || || | |||||
Sbjct 52548 TATTGTAGCTACTCATGG 52565
>seq3927
Length=49767
Score = 145 bits (160), Expect = 9e-30
Identities = 180/245 (73%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 180309 TGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTT 180368
|||| ||| || |||||||| || || || | ||||| || |||||| |||| || |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 180369 GAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATC 180428
||||| || || | || | || ||||| ||||| || ||||| | |||||| ||
Sbjct 26067 GAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAATT 26126
Query 180429 GCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCT 180488
|| | ||||| || ||||| || || ||||| |||||||| |||||||||||||
Sbjct 26127 GCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCG 26186
Query 180489 CCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAAC 180548
|| |||||| |||||| | || || ||||| | |||||| |||| || || || ||
Sbjct 26187 CCTAGTTTTGGTGTAGCATCTAT-ATTCGATTCATCCTCTTTTTTCAAGGGTTTCATAAT 26245
Query 180549 TGGAC 180553
|||||
Sbjct 26246 TGGAC 26250
>seq8630
Length=23577
Score = 86.0 bits (94), Expect = 8e-12
Identities = 99/132 (75%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 179518 GGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGT-CGCAGCACATGGCTACTT 179576
||||| || || || ||||| || || || || || ||||| ||| || ||||| || ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 179577 CGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCT 179636
||||| || |||||||||||||| || ||||| || || ||||| || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 179637 TGCTGCGTGGCC 179648
|| || |||||
Sbjct 7617 AGCCGCTTGGCC 7628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 607372598862720
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