Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4197 91.5 2e-13
seq270 91.5 2e-13
>seq4197
Length=36674
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|| ||||| |||||||| | || ||||||||| || || ||||| || || |||||
Sbjct 23441 CCTTCGTCGCGGGAGATCAACTCGTTCGAGAAGGTTAGTCCAGGCATCAGTCCTCGCTTT 23500
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153
|| | ||| || ||||| || || |||||||||||||| || || || || || ||
Sbjct 23501 TTTAGCCAAAATATCGCGCAGAAGCTTCCAGAGAAGAAGATACCTTCAACGCAGGCAAAA 23560
Query 130154 GCAAAGAGACGCTCAGCAAAGGA 130176
|||| | |||||||| |||||
Sbjct 23561 GCAACTATGCGCTCAGCGAAGGA 23583
>seq270
Length=105985
Score = 91.5 bits (100), Expect = 2e-13
Identities = 247/369 (67%), Gaps = 13/369 (4%)
Strand=Plus/Plus
Query 129858 ACTCAATGTACTCAGACATC--TTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGC 129915
|||||||||||||| |||| || || ||||| || || | ||||| |||||
Sbjct 91637 ACTCAATGTACTCACTCATCAGTTTTCCA--TTCATCCCAATCAACGCGCATGGCAGCGC 91694
Query 129916 GTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAAT--GGTC 129973
||| | || ||| ||||||| || ||||| || || | |||||| | | | ||||
Sbjct 91695 GTCACAAATAAACTCCTTCTCGATCTCCACCGCATCTCTCACGATCCCTTTTACTCGGTC 91754
Query 129974 TCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG-GCAAACTCCTGGTGGAG 130032
| | | || | | || || | | | ||| | || ||||| || ||| |
Sbjct 91755 TTCAGGA-AGCT-TCTTCTTCAGGATTTCGTAGA-TCAAACAAGCAAAATCACAGTGTAA 91811
Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092
|| ||||| | ||| || || || || |||||| || |||||||| ||||| || ||
Sbjct 91812 GCCTTCGTCTCTGGATATAAGCTCGTTGGAGAAGGTCAATCCTGGCATCAGACCGCGTTT 91871
Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152
|| | |||||| | || || || || ||||||||||| || ||||| || |||||
Sbjct 91872 TTTTAGCCAGAATACGGCGCAGAAGCTTCCGGAGAAGAAGATGCCTTCCACGCAAGCGAA 91931
Query 130153 CGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTG 130212
|| | || ||||| || ||||| ||| | ||| | ||| || ||||||||
Sbjct 91932 AGCGACGATTCGCTCGGCGAAGGATTCGGA---GGAATCGATCCATCGCAAGGCCCACTG 91988
Query 130213 CGCCTTTTT 130221
|||||| ||
Sbjct 91989 CGCCTTCTT 91997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615438927838640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |