Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq5412 345 5e-90 seq8546 255 7e-63 seq59 183 4e-41 seq29420 181 1e-40 seq25216 168 8e-37 seq3927 132 6e-26 seq2610 98.7 1e-15 seq8630 96.9 4e-15 seq13559 91.5 2e-13 >seq5412 Length=31808 Score = 345 bits (382), Expect = 5e-90 Identities = 493/692 (71%), Gaps = 8/692 (1%) Strand=Plus/Minus Query 177644 GGTTCGGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCT 177702 |||| || || ||||||| ||||| | | | || | ||| || || || | || Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225 Query 177703 TTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTG 177762 ||| | ||||||||||| || || || || || || |||||||| || ||| || || Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165 Query 177763 ATGTATGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTC 177822 | || || ||||| || || |||||||| || ||| ||| | ||||| ||| | Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105 Query 177823 CACTTCTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCT 177882 ||||| ||||| || |||||||| || ||| | ||||| ||| | |||||||||||||| Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045 Query 177883 TTCCAACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGG 177942 | | || || | || |||||| | | ||| | | |||||||||||||||||| Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985 Query 177943 GAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTC 178002 |||||| || ||| || |||||||| || ||||| ||| || || || || || || Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925 Query 178003 GCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCT 178062 || | || ||||||| ||| | | || || | ||| |||| || ||| | | | Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865 Query 178063 ATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAAC 178122 ||||| || || || ||| || ||||||| |||| |||| ||||| || ||||||||| Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805 Query 178123 ATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTC 178182 ||||| |||||||| || |||||||| ||||| |||||||| || | || | || ||| Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745 Query 178183 AGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAA 178242 || ||| |||||| |||| || || || | | |||||||| || || ||| Sbjct 14744 AG------GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691 Query 178243 AGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCT 178302 | || | ||||||| | | |||||||| |||||||| || || ||||| |||||| Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631 Query 178303 CATGGTTACTTCGGTCGCCTGATCTTCCAATA 178334 |||||||| || || || | ||||||||||| Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATA 14599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 178448 TCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACG 178507 |||| |||||||| || | | |||||||| || || | || || ||||| || Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537 Query 178508 TTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCC 178567 || | ||||| || |||||||||||||| ||||| || |||||||||| ||||||| Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477 Query 178568 CTCTTGACCTCGCTGC 178583 |||| ||||| || || Sbjct 14476 CTCTCGACCTAGCAGC 14461 >seq8546 Length=31398 Score = 255 bits (282), Expect = 7e-63 Identities = 329/448 (73%), Gaps = 12/448 (3%) Strand=Plus/Minus Query 178141 CACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCT 178200 |||||||| ||||| |||||||| || || || || | ||||||| ||||| |||||| Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145 Query 178201 CTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAG--AACTATGGT 178257 |||| || || | | | | || | |||||||| || || || || | || | ||| Sbjct 13144 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATAAA--TCCGCTAATGAAGGT 13088 Query 178258 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGT 178317 |||| || |||||||| || || || | || || || |||||||||||||| || || Sbjct 13087 TACAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGC 13028 Query 178318 CGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCA 178377 || | ||||||||||| || |||||| | || | ||| | || |||||| | | Sbjct 13027 CGATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTT 12968 Query 178378 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAAC 178437 || |||||||| || ||||| ||||| ||| || | ||| |||| || |||||||| | | Sbjct 12967 GCTTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATC 12908 Query 178438 CTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTG-AACAC 178496 || ||||| ||||| |||||||| || | | |||||| ||| ||| || || Sbjct 12907 CTAAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGT-----CAAGGTCGTGTAATTA 12853 Query 178497 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGC 178556 ||||| || || | ||||| ||| |||||||||||||| ||||| || |||||||| Sbjct 12852 TTGGGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 12793 Query 178557 TCACAACTTCCCTCTTGACCTCGCTGCT 178584 ||| ||||||| ||| ||||| |||||| Sbjct 12792 TCATAACTTCCATCTAGACCTAGCTGCT 12765 >seq59 Length=339703 Score = 183 bits (202), Expect = 4e-41 Identities = 196/259 (76%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 178051 TTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAA 178110 || ||||| | |||||| || || | ||| || ||||||| |||| |||| ||||| Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368 Query 178111 GCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGT 178170 || |||||||||||||| |||||||| || |||||||| |||| |||||||| || || Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428 Query 178171 GGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACC 178230 || || || ||||||| ||||| |||||| |||| || || || || | |||||| Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488 Query 178231 ACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAAC 178290 || || || ||| | || | ||||||| ||| |||||||| |||||||| || || Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548 Query 178291 ATCGTTGCTGCTCATGGTT 178309 || || ||| ||||||||| Sbjct 52549 ATTGTAGCTACTCATGGTT 52567 >seq29420 Length=7120 Score = 181 bits (200), Expect = 1e-40 Identities = 256/360 (71%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 177711 TGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGG 177770 ||||||||| || || || || || || |||||||| || |||| || || | | || Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474 Query 177771 CAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTA 177830 ||||| || || ||||||| || |||| ||||| ||||| ||| | ||||| || Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534 Query 177831 TCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACT 177890 ||| || |||||||| || ||| | ||||| ||| | |||||||||||||||| | || Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594 Query 177891 CGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTC 177950 | | || |||||| | | ||| | | |||||||||||||||||||||||| Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654 Query 177951 TTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGC 178010 || ||| || |||||||| || ||||| ||| || || || | ||| || || || || Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714 Query 178011 ATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCT 178070 || || | ||| | | || || | |||||||| || ||||| | |||||| || Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774 >seq25216 Length=8180 Score = 168 bits (186), Expect = 8e-37 Identities = 188/251 (75%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 177961 GGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTA 178020 |||||||| || ||||| | | || || || ||||| || || || || ||||||| Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194 Query 178021 TTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGT 178080 ||| | | || || | |||||||| || ||||| | |||||| || || || | Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134 Query 178081 GGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTC 178140 || || ||||||| |||| |||| ||||| | |||||||||||||| |||||||| || Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074 Query 178141 CACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCT 178200 |||||||| ||||| | |||||| || || || || || |||||||| ||||| |||||| Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 7014 Query 178201 CTGGTTACTTC 178211 |||| || || Sbjct 7013 TTGGTAACCTC 7003 >seq3927 Length=49767 Score = 132 bits (146), Expect = 6e-26 Identities = 180/247 (73%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 179126 ATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTT 179185 |||| ||||||| || ||||| || || || | || |||||||| ||| | || || || Sbjct 26006 ATGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATT 26065 Query 179186 TGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAA 179244 |||| | || || ||| || | | || ||||| |||||||| || || | |||||||| Sbjct 26066 TGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTATTTGGTCCAA 26124 Query 179245 TTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTG 179304 |||| | ||||| || || ||||| || ||||| || || ||||| |||||||||| Sbjct 26125 TTGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTG 26184 Query 179305 CGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACA 179364 |||| ||||| || ||| | || || || ||| | ||||| | || || || || | Sbjct 26185 CGCCTAGTTTTGGTGTAGCATCTATATT-CGATTCATCCTCTTTTTTCAAGGGTTTCATA 26243 Query 179365 ACTGGAC 179371 | ||||| Sbjct 26244 ATTGGAC 26250 >seq2610 Length=55653 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 176161 CTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGT 176220 |||| ||| || || |||| | |||||| | || || | || || ||||||| Sbjct 39267 CTGATGATGTATACATCTTGGACTCAGCTGAGAATGCTGGCTTGGATCTTCCATACTCGT 39326 Query 176221 GCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAA 176280 |||| |||||||| ||||| | ||||| || || || || || || | || || || Sbjct 39327 GCCGAGCTGGTGCTTGTTCAACCTGTGCTGGGAAGCTGATTTCTGGATCAGTCGACCAGT 39386 Query 176281 GCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTT 176340 || || ||||||||||||||||| || || || | | | |||||||| || Sbjct 39387 CAGACGGGTCCTTCCTTGATGATGACCAAATTAATCAGGGCTACGTACTGACTTGCGTCG 39446 Query 176341 CATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTA 176392 | || ||||| | |||||||||||| | ||| | ||||||| ||||| || Sbjct 39447 CGTACCCTACCGGAGATTGTGTGATTCATACTCACAAAGAAGGTGAACTCTA 39498 >seq8630 Length=23577 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/133 (77%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 178255 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTT-GCTGCTCATGGTTACTT 178313 |||||||| || |||||||| || || || || || ||||| |||||||||||||| || Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556 Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373 ||||| | ||||||||||| || |||||||| || ||||| | || ||||| | Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616 Query 178374 CGCAGCATGGCCT 178386 || || |||||| Sbjct 7617 AGCCGCTTGGCCT 7629 >seq13559 Length=16232 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 178171 GGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAAC 178229 || || || |||||||| ||||| |||||| |||| || || | ||| | || | ||||| Sbjct 5671 GGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGCTTGATCAGGGAAAC 5613 Query 178230 CACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAA 178289 || || || ||| | || | |||||||| || |||||||| || | || || || Sbjct 5612 CATAGAAAATGAATATGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGAAAACTTAGAA 5553 Query 178290 CATCGTTGCTGCTCATGGTTACTTCGGTC 178318 ||||| |||||||||||||| |||| || Sbjct 5552 TATCGTAGCTGCTCATGGTTATTTCGATC 5524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593418136339040