Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 345 5e-90
seq8546 255 7e-63
seq59 183 4e-41
seq29420 181 1e-40
seq25216 168 8e-37
seq3927 132 6e-26
seq2610 98.7 1e-15
seq8630 96.9 4e-15
seq13559 91.5 2e-13
>seq5412
Length=31808
Score = 345 bits (382), Expect = 5e-90
Identities = 493/692 (71%), Gaps = 8/692 (1%)
Strand=Plus/Minus
Query 177644 GGTTCGGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCT 177702
|||| || || ||||||| ||||| | | | || | ||| || || || | ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 177703 TTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTG 177762
||| | ||||||||||| || || || || || || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 177763 ATGTATGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTC 177822
| || || ||||| || || |||||||| || ||| ||| | ||||| ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 177823 CACTTCTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCT 177882
||||| ||||| || |||||||| || ||| | ||||| ||| | ||||||||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 177883 TTCCAACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGG 177942
| | || || | || |||||| | | ||| | | ||||||||||||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 177943 GAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTC 178002
|||||| || ||| || |||||||| || ||||| ||| || || || || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 178003 GCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCT 178062
|| | || ||||||| ||| | | || || | ||| |||| || ||| | | |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 178063 ATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAAC 178122
||||| || || || ||| || ||||||| |||| |||| ||||| || |||||||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 178123 ATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTC 178182
||||| |||||||| || |||||||| ||||| |||||||| || | || | || |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 178183 AGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAA 178242
|| ||| |||||| |||| || || || | | |||||||| || || |||
Sbjct 14744 AG------GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 178243 AGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCT 178302
| || | ||||||| | | |||||||| |||||||| || || ||||| ||||||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 178303 CATGGTTACTTCGGTCGCCTGATCTTCCAATA 178334
|||||||| || || || | |||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATA 14599
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 178448 TCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACG 178507
|||| |||||||| || | | |||||||| || || | || || ||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 178508 TTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCC 178567
|| | ||||| || |||||||||||||| ||||| || |||||||||| |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 178568 CTCTTGACCTCGCTGC 178583
|||| ||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 255 bits (282), Expect = 7e-63
Identities = 329/448 (73%), Gaps = 12/448 (3%)
Strand=Plus/Minus
Query 178141 CACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCT 178200
|||||||| ||||| |||||||| || || || || | ||||||| ||||| ||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 178201 CTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAG--AACTATGGT 178257
|||| || || | | | | || | |||||||| || || || || | || | |||
Sbjct 13144 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATAAA--TCCGCTAATGAAGGT 13088
Query 178258 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGT 178317
|||| || |||||||| || || || | || || || |||||||||||||| || ||
Sbjct 13087 TACAGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGC 13028
Query 178318 CGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCA 178377
|| | ||||||||||| || |||||| | || | ||| | || |||||| | |
Sbjct 13027 CGATTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTT 12968
Query 178378 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAAC 178437
|| |||||||| || ||||| ||||| ||| || | ||| |||| || |||||||| | |
Sbjct 12967 GCTTGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATC 12908
Query 178438 CTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTG-AACAC 178496
|| ||||| ||||| |||||||| || | | |||||| ||| ||| || ||
Sbjct 12907 CTAAACGGCTTCAATTTCAACCAATCTGTAGTTGATAGT-----CAAGGTCGTGTAATTA 12853
Query 178497 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGC 178556
||||| || || | ||||| ||| |||||||||||||| ||||| || ||||||||
Sbjct 12852 TTGGGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 12793
Query 178557 TCACAACTTCCCTCTTGACCTCGCTGCT 178584
||| ||||||| ||| ||||| ||||||
Sbjct 12792 TCATAACTTCCATCTAGACCTAGCTGCT 12765
>seq59
Length=339703
Score = 183 bits (202), Expect = 4e-41
Identities = 196/259 (76%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 178051 TTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAA 178110
|| ||||| | |||||| || || | ||| || ||||||| |||| |||| |||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 178111 GCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGT 178170
|| |||||||||||||| |||||||| || |||||||| |||| |||||||| || ||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 178171 GGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACC 178230
|| || || ||||||| ||||| |||||| |||| || || || || | ||||||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 178231 ACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAAC 178290
|| || || ||| | || | ||||||| ||| |||||||| |||||||| || ||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 178291 ATCGTTGCTGCTCATGGTT 178309
|| || ||| |||||||||
Sbjct 52549 ATTGTAGCTACTCATGGTT 52567
>seq29420
Length=7120
Score = 181 bits (200), Expect = 1e-40
Identities = 256/360 (71%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 177711 TGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGG 177770
||||||||| || || || || || || |||||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 177771 CAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTA 177830
||||| || || ||||||| || |||| ||||| ||||| ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 177831 TCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACT 177890
||| || |||||||| || ||| | ||||| ||| | |||||||||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 177891 CGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTC 177950
| | || |||||| | | ||| | | ||||||||||||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 177951 TTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGC 178010
|| ||| || |||||||| || ||||| ||| || || || | ||| || || || ||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 178011 ATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCT 178070
|| || | ||| | | || || | |||||||| || ||||| | |||||| ||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq25216
Length=8180
Score = 168 bits (186), Expect = 8e-37
Identities = 188/251 (75%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 177961 GGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTA 178020
|||||||| || ||||| | | || || || ||||| || || || || |||||||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 178021 TTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGT 178080
||| | | || || | |||||||| || ||||| | |||||| || || || |
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 178081 GGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTC 178140
|| || ||||||| |||| |||| ||||| | |||||||||||||| |||||||| ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 178141 CACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCT 178200
|||||||| ||||| | |||||| || || || || || |||||||| ||||| ||||||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 7014
Query 178201 CTGGTTACTTC 178211
|||| || ||
Sbjct 7013 TTGGTAACCTC 7003
>seq3927
Length=49767
Score = 132 bits (146), Expect = 6e-26
Identities = 180/247 (73%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 179126 ATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTT 179185
|||| ||||||| || ||||| || || || | || |||||||| ||| | || || ||
Sbjct 26006 ATGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATT 26065
Query 179186 TGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAA 179244
|||| | || || ||| || | | || ||||| |||||||| || || | ||||||||
Sbjct 26066 TGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTATTTGGTCCAA 26124
Query 179245 TTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTG 179304
|||| | ||||| || || ||||| || ||||| || || ||||| ||||||||||
Sbjct 26125 TTGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTG 26184
Query 179305 CGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACA 179364
|||| ||||| || ||| | || || || ||| | ||||| | || || || || |
Sbjct 26185 CGCCTAGTTTTGGTGTAGCATCTATATT-CGATTCATCCTCTTTTTTCAAGGGTTTCATA 26243
Query 179365 ACTGGAC 179371
| |||||
Sbjct 26244 ATTGGAC 26250
>seq2610
Length=55653
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 176161 CTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGT 176220
|||| ||| || || |||| | |||||| | || || | || || |||||||
Sbjct 39267 CTGATGATGTATACATCTTGGACTCAGCTGAGAATGCTGGCTTGGATCTTCCATACTCGT 39326
Query 176221 GCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAA 176280
|||| |||||||| ||||| | ||||| || || || || || || | || || ||
Sbjct 39327 GCCGAGCTGGTGCTTGTTCAACCTGTGCTGGGAAGCTGATTTCTGGATCAGTCGACCAGT 39386
Query 176281 GCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTT 176340
|| || ||||||||||||||||| || || || | | | |||||||| ||
Sbjct 39387 CAGACGGGTCCTTCCTTGATGATGACCAAATTAATCAGGGCTACGTACTGACTTGCGTCG 39446
Query 176341 CATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTA 176392
| || ||||| | |||||||||||| | ||| | ||||||| ||||| ||
Sbjct 39447 CGTACCCTACCGGAGATTGTGTGATTCATACTCACAAAGAAGGTGAACTCTA 39498
>seq8630
Length=23577
Score = 96.9 bits (106), Expect = 4e-15
Identities = 102/133 (77%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 178255 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTT-GCTGCTCATGGTTACTT 178313
|||||||| || |||||||| || || || || || ||||| |||||||||||||| ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373
||||| | ||||||||||| || |||||||| || ||||| | || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 178374 CGCAGCATGGCCT 178386
|| || ||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq13559
Length=16232
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 178171 GGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAAC 178229
|| || || |||||||| ||||| |||||| |||| || || | ||| | || | |||||
Sbjct 5671 GGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGCTTGATCAGGGAAAC 5613
Query 178230 CACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAA 178289
|| || || ||| | || | |||||||| || |||||||| || | || || ||
Sbjct 5612 CATAGAAAATGAATATGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGAAAACTTAGAA 5553
Query 178290 CATCGTTGCTGCTCATGGTTACTTCGGTC 178318
||||| |||||||||||||| |||| ||
Sbjct 5552 TATCGTAGCTGCTCATGGTTATTTCGATC 5524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593418136339040
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