Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq343 118 2e-21 >seq343 Length=177656 Score = 118 bits (130), Expect = 2e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || ||||| || || |||| ||| | ||| || || || || || ||||| Sbjct 100706 GTTCCTCCCCTAAGCCTCAAAACCAGATGAAGAGTTGACTCCTTCTGAATGTTGTAATCC 100765 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | |||||| || | ||| || ||||| || ||||||||||||||||| |||||||||||| Sbjct 100766 GCAAGAGTCCTCCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCCGGA 100825 Query 146168 GGAATTCCTTCTTTATCTTG 146187 ||||||||||| || || || Sbjct 100826 GGAATTCCTTCCTTGTCCTG 100845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743266212230400