Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 1e-11 >seq8 Length=1027367 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||| || || |||| ||||| ||| | || | Sbjct 606335 GACTTTGACTATGATTACTTTGGCTTCAAGACCCTTGAGAGGTCGTACCTCTTGAAGGTA 606276 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| | || ||| | ||| |||||||||||| | || ||||| || |||||| Sbjct 606275 CAAGGGAAGGTTGTCGAAAGGCCTCAACACATGTTGATGAGGGTTGCTGTTGGAATTCAC 606216 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTA-CACCGGAATGAGTGAACGCTGGATGAC 248987 ||||| || || || | ||| |||| || ||| | ||| | | || ||| | || Sbjct 606215 AAGGAGGATATTGATTCTGCTCTCAAGACATATCACATG-ATGTCTCAGCGGTGGTTCAC 606157 Query 248988 ACATGCCACACCGACGCTCTTCAA 249011 |||||| | ||||| || ||||| Sbjct 606156 TCATGCCTCCCCGACCCTTTTCAA 606133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073381255092160