Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq44 102 8e-17 >seq44 Length=533671 Score = 102 bits (112), Expect = 8e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || |||||||| || || ||||| ||||||||| |||||| || ||||| ||||| || Sbjct 310922 CAAGCAAAATCGCAGTGGAGGCCTTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAAG 310981 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 |||||||||||||||| ||||| | ||||||||| ||| Sbjct 310982 CCTGGCATCAATCCTCTCTTTTTGAGCCAAAATATCGCA 311020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479560125183000