Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq19 84.2 2e-11 seq420 82.4 7e-11 >seq19 Length=713669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| || ||||| | || || ||||| | || || || | ||||| |||| | || Sbjct 623979 AAAAAATATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACTCTCGAGGTCGA 623920 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 |||||||||||| | ||||| ||||| ||||| || ||||| ||||| Sbjct 623919 GAGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATTCCTCC 623860 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || || || | || || | || |||||| || ||||| || | | | | || ||| Sbjct 623859 GGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCGCCGA 623800 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || || || |||||| ||||||||||||| Sbjct 623799 TTACAACATCCAGAAGGAGTCTACTCTCCATCTGGTCCT 623761 >seq420 Length=153407 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| || || | || ||| |||| | || || | Sbjct 119321 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTCGAGGTTGAGTCCTCC 119262 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 119261 GACACCATCGACAATGTGAAGACCAAGATCCAGGACAAGGAGGGAATCCCGCCGGACCAG 119202 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || |||||| || ||||| || | | | | || |||||| ||| Sbjct 119201 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCGCCGACTACAAC 119142 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 || || || || || || |||| ||||| || | ||||| |||||| Sbjct 119141 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTCCGCCTTAGGGGAGGA 119094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478494898076400