Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 2e-11 >seq8 Length=1027367 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| || || || | ||||| | ||| | |||||| ||||| | Sbjct 605992 ATGAAAGATGATAGCATTGAAGGGATATACGACACCTTGAAGGAGTGTGCTGTTATTAGC 605933 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || || || ||||||||||| ||| | |||||| ||||| | |||| ||||| || Sbjct 605932 AAATCAGCCGGAGGAATTGGTGTCTCGGTTCACAATATTCGTTCGACAG-GGAGTTATAT 605874 Query 363741 TCGCGGCA-CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 ||| || | || |||| || ||||| | ||||| ||||| || || || | | | Sbjct 605873 TCGGGGAACCAATGGGA-CGTCTAATGGCATTGTTCCAATGCTACGGGTTTTCAATGACA 605815 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||| | || || || || || ||||| ||| | ||||| Sbjct 605814 CTGCTCGTTATGTTGATCAAGGGGGAGGGAAGAGGAAAGG 605775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302886105392090