Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq168 84.2 2e-11 >seq168 Length=274740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || ||||| ||||| ||||| ||| | || || | | Sbjct 146384 ATGCAGATTTTTGTTAAGACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAAAGCTCC 146325 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || || ||| |||| || || Sbjct 146324 GACACCATTG-ACAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCA 146266 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | || | ||||||||||||| | || |||| ||| |||| || || || Sbjct 146265 GCAGAGGTTGATCTTTGCGGGCAAACAACTCGAGGATGGACGTACCCTGGCTGACTACAA 146206 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| || || ||||| ||| | || |||||||| | | || || |||| Sbjct 146205 CATCCAGAAGGAGTCAACTCTTCACTTGGTGTTGCGTCTTCGTGGTGGAA 146156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425198877279400