Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq196 84.2 2e-11 >seq196 Length=255184 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | || | || ||||| ||||||||||| || || Sbjct 35874 ACCACAAACATGAGCAATCATGCATGTCAGAAGTGAATACGAAGCAATGTTAAATGGCAC 35933 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 |||| |||||||| | || | |||||||| |||||| || | ||| || | ||||| Sbjct 35934 GCCCAGGCCCATGTCAGCAGATCGCTGATACATCTGACATGACAACTCCCCATTGGCTAC 35993 Query 20359 ATAAAATTGACATAACAAGTGACAGG 20384 ||| || || ||||||| | ||| Sbjct 35994 ATAGAACTGCAGAAACAAGTCAAAGG 36019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441218347105800