Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq143 96.9 4e-15 >seq143 Length=298601 Score = 96.9 bits (106), Expect = 4e-15 Identities = 175/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| || ||||| | || || |||||| ||||| ||||| | || |||||| Sbjct 58189 CCCTCGTCTCGCGAGATCAACTCGTTGGAGAAGGTGAGTCCCGGCATCAACCCGCGCTTC 58130 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || || || || || ||||||||||| || || || || ||||| Sbjct 58129 TTTAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAG 58070 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGC 126244 || | ||| ||||| || ||||| | || ||| | ||| | |||||||| Sbjct 58069 GCGATGAGGCGCTCGGCGAAGGA-CTCG--GAGCCGTCGATCCAGCGGAGGGCCCACTGG 58013 Query 126245 GCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCTGAT 126304 ||||| ||| ||| || ||||| || | ||| || ||||| |||| || | Sbjct 58012 GCCTTCTTCGCGACGCAAGGGACAGTGTCGATGGCGCGGAAGAGGCGGCTCTTCTCGGCG 57953 Query 126305 GGATCTTTGATGTA 126318 | ||| |||||||| Sbjct 57952 GAATCCTTGATGTA 57939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597144563574600