Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq143 118 1e-21 >seq143 Length=298601 Score = 118 bits (130), Expect = 1e-21 Identities = 182/256 (71%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 119510 AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCT 119569 ||||||| | || || ||||| | ||| || |||| ||||| ||||| | || | Sbjct 58192 AAGCCCT-CGTCTCGCGAGATCAACTCGTTGGAGAAGGTGAGTCCCGGCATCAACCCGCG 58134 Query 119570 TTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGC 119629 ||||||||||| |||||||| || || ||||| || |||||||| || || || ||||| Sbjct 58133 CTTCTTTAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGC 58074 Query 119630 GAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAACCACTTGAGAGCCCAGT 119688 ||| |||| || ||||| || || | ||| || ||||| ||| ||| ||||| | Sbjct 58073 GAAGGCGATGAGGCGCTCGGCGAAGGACTCG-GAGCCGTCGATCCAGCGGAGGGCCCACT 58015 Query 119689 TGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAG 119748 |||||| | | | ||| |||||||| | |||||| ||| || | |||| || | Sbjct 58014 GGGCCTTCTTCGCGACGCAAGGGACAGTGTCGATGGCGCGGAAGAGGCGGCTCTTCTCGG 57955 Query 119749 CACCATCCTTAATATA 119764 | |||||| || || Sbjct 57954 CGGAATCCTTGATGTA 57939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588769895211000