Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq716 208 9e-49 seq168 102 9e-17 >seq716 Length=92840 Score = 208 bits (230), Expect = 9e-49 Identities = 216/283 (76%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 168952 TGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCA 169011 |||||||||||||||||| ||| | || |||||||| ||| | ||||| ||||| ||||| Sbjct 34196 TGGTATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCA 34137 Query 169012 CAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCT 169071 | | || |||||||| || || | |||| ||| ||||| ||| | ||||| || || || Sbjct 34136 CTATATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 34077 Query 169072 ATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGA 169131 |||| || || |||||||| | ||||| ||| | | || || | || || || | Sbjct 34076 ATTCAGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAA 34017 Query 169132 AGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGC 169191 |||||| || | ||||||| ||||||||||| |||||||||||||||||||| || Sbjct 34016 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGC 33957 Query 169192 AGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGT 169234 || ||||| || || || |||| |||||||| ||||| ||| Sbjct 33956 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCGAGT 33914 >seq168 Length=274740 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 169280 GTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGA 169339 || ||| || | ||||| || ||| | ||||| | | ||||| || ||||| || || Sbjct 245235 GTAGTAGGTATTTGGTTTAC-TCTTTAGGTATTAGCATCATGGCTTTTAACTTAAATGGT 245293 Query 169340 TTTAACTTTAACCAATCAGTTGTAGAT-GTTAACGGTAAGATCATTCCTACATGGGGTGA 169398 ||||| || || |||| || || ||| ||||| ||| | ||| ||| | || | | Sbjct 245294 TTTAATTTCAATCAATTTGTAGTTGATAGTTAA-GGTCGTGTAATTAATACCTAGGTTAA 245352 Query 169399 CGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTT 169458 | ||||| | || || |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct 245353 TATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 245412 Query 169459 CCCACTAGACTTAGC 169473 | | |||||| |||| Sbjct 245413 CTCTCTAGACCTAGC 245427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564244080717600