Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq716 178 2e-39 seq168 96.9 4e-15 >seq716 Length=92840 Score = 178 bits (196), Expect = 2e-39 Identities = 208/281 (74%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211 || ||||||||||| ||||| |||| || ||||| ||| | ||||| ||||| |||||| Sbjct 34195 GGTATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCAC 34136 Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271 | || |||||||||||||| | |||| ||| || |||||| | ||||| || | || Sbjct 34135 TATATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 34076 Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331 ||| || || || ||||| | ||||| ||| | | || || | || ||||| || Sbjct 34075 TTCAGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAAT 34016 Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391 || || || | || |||| |||||| ||||| |||||||| || || ||||| || Sbjct 34015 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCC 33956 Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAG 170432 || ||||| || ||||| || | |||||||||||||| || Sbjct 33955 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCGAG 33915 >seq168 Length=274740 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 170478 TGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGG 170537 ||||||| | || ||||| ||| | | |||||| ||| ||||| |||||| | ||||| Sbjct 245234 TGTAGTAGGTATTTGGTTTACT-CTTTAGGTATTAGCATCATGGCTTTTAACTTAAATGG 245292 Query 170538 ATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGA 170597 ||||| ||||| || | | || ||| | | ||| ||| || ||| | || | Sbjct 245293 TTTTAATTTCAATCAATTTGTAGTTGATAGTTAAGGTCGTGTAATTAATACCTAGGTTAA 245352 Query 170598 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTT 170657 | ||||| | || || || ||||||||||| |||||||| |||||||| || ||||| Sbjct 245353 TATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 245412 Query 170658 CCCACTTGAC 170667 | | || ||| Sbjct 245413 CTCTCTAGAC 245422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582644039628000