Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq716 145 2e-30 seq168 104 7e-18 >seq716 Length=92840 Score = 145 bits (160), Expect = 2e-30 Identities = 202/283 (71%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 26263 TGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACA 26322 ||| |||||||| || |||||| ||||||| ||||||||| | ||||| ||||| || || Sbjct 34196 TGGTATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCA 34137 Query 26323 TAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCT 26382 |||| || ||||||||||| | |||| ||||| ||||| || ||||| || | || Sbjct 34136 CTATATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 34077 Query 26383 TTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGA 26442 ||| |||||| || || ||||| || || | || |||| ||||| | Sbjct 34076 ATTCAGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAA 34017 Query 26443 AGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGC 26502 | || ||| | || || | || || ||||| ||||| || ||||||||||| || Sbjct 34016 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGC 33957 Query 26503 TGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGT 26545 || || || || ||||| |||| || || || ||||||||| Sbjct 33956 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCGAGT 33914 >seq168 Length=274740 Score = 104 bits (114), Expect = 7e-18 Identities = 145/199 (73%), Gaps = 11/199 (6%) Strand=Plus/Plus Query 26591 GTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGT 26650 || || || || ||| | || ||| | ||||| ||| ||||| |||||| |||||||| Sbjct 245235 GTAGTAGGTATTTGGTTTAC-TCTTTAGGTATTAGCATCATGGCTTTTAACTTAAATGGT 245293 Query 26651 TTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATG----GAAAGATAATACCTACATGGG 26705 ||||| || || || | ||||| ||| ||||| | | || ||||||||| || Sbjct 245294 TTTAATTTCAATCAATTTGTAGTTGATAGTTAAGGTCGTGTAA-TTAATACCTA----GG 245348 Query 26706 CTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATA 26765 | || | | ||||| ||||| || || | ||||||||||| || ||||||||||||| Sbjct 245349 TTAATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATA 245408 Query 26766 ACTTTCCACTTGACTTAGC 26784 |||| | || ||| |||| Sbjct 245409 ACTTCTCTCTAGACCTAGC 245427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146677622183880