Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq716 176 5e-39 seq168 93.3 5e-14 >seq716 Length=92840 Score = 176 bits (194), Expect = 5e-39 Identities = 204/275 (74%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 162964 ATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAAC 163023 |||||||| || || ||| ||||||| |||| ||| | || || ||||| |||||| | Sbjct 34192 ATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCACTAT 34133 Query 163024 ATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTT 163083 ||||| |||||||| || | |||| | || || || ||||||||||| || || || || Sbjct 34132 ATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 34073 Query 163084 AGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAG 163143 |||||||| || ||||| | || || ||| | | || || |||| || || | || Sbjct 34072 AGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAATGAA 34013 Query 163144 TCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCT 163203 || || | ||||| | ||||| ||||| ||||| || || || ||||| || ||| Sbjct 34012 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCT 33953 Query 163204 CATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 ||||| || ||||| || ||||||||||| ||||| Sbjct 33952 CATGGTTATTTTGGCCGATTGATCTTCCAATATGC 33918 >seq168 Length=274740 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 163327 ATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGT--GGTA 163384 ||||| || ||| | || ||||| || ||||| |||| || ||||| || | ||| Sbjct 245273 ATGGCTTTTAACTTAAATGGTTTTAATTTCAATCAATTTGTAGTTGAT--AGTTAAGGTC 245330 Query 163385 AAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGC 163444 || ||| ||| | || ||||| ||||| | || ||||||||||||||||||| Sbjct 245331 GTGTAATTAATACCTAGGTTAATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGC 245390 Query 163445 ACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 163486 | || ||||||||||| |||||| | || ||||| || |||| Sbjct 245391 ATGAACGTAATGCTCATAACTTCTCTCTAGACCTAGCGGCTG 245432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552891254887800