Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq716 150 5e-32 >seq716 Length=92840 Score = 150 bits (166), Expect = 5e-32 Identities = 207/285 (73%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 18075 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTC 18134 || ||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 33915 CTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 33974 Query 18135 TCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTA 18194 ||||| ||||| || ||| | || || | || ||| ||| || || |||| || Sbjct 33975 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTTCCTT 34034 Query 18195 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 18251 || || | |||| || |||| || || |||||| ||||| | || |||||| Sbjct 34035 ATCAAACTAGAGGT--TACCAAGGAA-CCATGTATAGCACTGAATAGGGAGCCGCCGAAT 34091 Query 18252 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAAT 18311 || || || ||||| | |||| | || || ||||||||||||| ||| || ||||| ||| Sbjct 34092 ACACCAGCTACACCTAACATAAGAAATGGGTGCATAAGGATATAGTGCTCAGCTTGAAAT 34151 Query 18312 ACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCA 18356 || | ||| || |||||||||| || || |||||||||||| Sbjct 34152 ACAATCATAAAGTTGAAAGTACTAGAGATTCCTAGAGGCATACCA 34196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151268095616530