Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq716 185 1e-41 seq168 93.3 5e-14 >seq716 Length=92840 Score = 185 bits (204), Expect = 1e-41 Identities = 206/275 (75%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 155434 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAAT 155493 |||||||| || |||||| ||||||| |||| |||| | || || ||||| || ||| || Sbjct 34192 ATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCACTAT 34133 Query 155494 ATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTC 155553 |||||||||||||| || | ||| | || ||||| ||||| ||||| || || || ||| Sbjct 34132 ATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 34073 Query 155554 TCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAG 155613 |||||| || ||||| ||||| || ||| | || | |||| || || | || Sbjct 34072 AGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAATGAA 34013 Query 155614 TCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCT 155673 ||| || | ||||||| ||||| ||||| |||||||| ||||| ||||| || ||| Sbjct 34012 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCT 33953 Query 155674 CATGGATACTTCGGTCGTCTTATCTTCCAGTATGC 155708 ||||| || || || || | |||||||| ||||| Sbjct 33952 CATGGTTATTTTGGCCGATTGATCTTCCAATATGC 33918 >seq168 Length=274740 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/163 (73%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 155797 ATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGT 155853 ||||| || ||| | || ||||| || ||||| || | |||||| || |||| ||| Sbjct 245273 ATGGCTTTTAACTTAAATGGTTTTAATTTCAATCAATTTGTAGTTGA---TAGTTAAGGT 245329 Query 155854 AAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATG 155913 || || ||| | || | || ||||||| ||| ||||||||||||||| ||| Sbjct 245330 CGTGTAATTAATACCTAGGTTAATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATG 245389 Query 155914 CACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTG 155956 || || ||||| ||||| |||||| |||| ||||| || |||| Sbjct 245390 CATGAACGTAATGCTCATAACTTCTCTCTAGACCTAGCGGCTG 245432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584630544232200