Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq716 190 2e-43 seq168 84.2 2e-11 >seq716 Length=92840 Score = 190 bits (210), Expect = 2e-43 Identities = 207/275 (75%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 67605 GCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCT 67664 ||||| ||||||||||| || || || || |||||||| || ||||| || || || ||| Sbjct 33918 GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTTTCT 33977 Query 67665 TCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATA 67724 || ||||| ||||| ||||||| | || || || | || || |||| || || Sbjct 33978 TCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTTCCTTATC 34037 Query 67725 AGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCT 67784 | | ||| || || | ||||| || |||||||| || || || || ||||||||||| Sbjct 34038 AAACTAGAGGTTACCAAGGAACCATGTATAGCACTGAATAGGGAGCCGCCGAATACACCA 34097 Query 67785 GCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAAC 67844 ||||| || | |||| | ||||||||||||||||| | |||||| ||||| || || | | Sbjct 34098 GCTACACCTAACATAAGAAATGGGTGCATAAGGATATAGTGCTCAGCTTGAAATACAATC 34157 Query 67845 ATGTAGTTAAAAGTACCAGAAATACCAAGAGGCAT 67879 || |||| ||||||| ||| || || |||||||| Sbjct 34158 ATAAAGTTGAAAGTACTAGAGATTCCTAGAGGCAT 34192 >seq168 Length=274740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/162 (72%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 67357 CAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAA 67416 |||| || ||||| |||| |||||| ||||| ||||| || |||||||||||||| |||| Sbjct 245432 CAGCCGCTAGGTCTAGAGAGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAA 245373 Query 67417 GTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACC--ACCTGCGTCAAC 67474 | || | ||||| ||| | || | ||| ||| || ||| | || ||||| Sbjct 245372 GATTAGCACGGTTAATGATATTAACCTAGGTATTAATTACACGACCTTAACT--ATCAAC 245315 Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCAT 67516 || |||| ||||| || ||||| || | ||| || ||||| Sbjct 245314 TACAAATTGATTGAAATTAAAACCATTTAAGTTAAAAGCCAT 245273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566748803914200