Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 3e-13 >seq19 Length=713669 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | | ||||||||||||| || | ||| || || || || ||| Sbjct 623515 ATACCACCGCGGAGCCTGAGTACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 623574 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | || || || || || ||||| || || | ||||| || || || Sbjct 623575 GCGAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGC 623634 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || || |||| || | || || || || || ||| Sbjct 623635 GGGATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCAGAGCTCTCG 623694 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| ||||| || ||||| ||||| ||||| || || || ||||| Sbjct 623695 ACTTCTAGGGTTATCGTCTTACCGGTTAGGGTTTTGACGAAGATCTGCAT 623744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899339577188400