Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq168 93.3 6e-14 >seq168 Length=274740 Score = 93.3 bits (102), Expect = 6e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || ||||| ||||| || || || || |||||||| || Sbjct 146157 AATGCAGATTTTCGTGAAGACCTTGACCGGAAAGACCATCACTTTGGAAGTCGAGAGCTC 146098 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| |||||||| ||||| || || || || || || || ||||| || Sbjct 146097 GGACACCATTGACAACGTGAAGGCCAAAATTCAGGACAAGGAGGGTATCCCCCCAGACCA 146038 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||| | ||||| ||||||||||| ||| ||| || | |||| || || Sbjct 146037 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCAGACTACAA 145978 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| |||| ||||| || ||| Sbjct 145977 CATTCAGAAGGAGTCGACCCTTCACTTGGTG 145947 Score = 87.8 bits (96), Expect = 3e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | || || | || || ||||| || || || || || ||| || Sbjct 146613 AATGCAAATATTTGTCAAGACCCTCACCGGGAAAACCATCACCTTGGAGGTAGAAAGCTC 146554 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || ||| || || || || || || ||||| || ||||| || Sbjct 146553 CGACACCATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 146494 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || |||||||| | ||||||||||||||||| ||| | |||| | | || || || Sbjct 146493 GCAGAGATTGATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAA 146434 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || ||||| | || ||||| || ||| Sbjct 146433 CATTCAGAAAGAATCCACCCTTCACTTGGTG 146403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731615890542000