Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq1 260 2e-64 seq716 163 3e-35 seq257 156 5e-33 seq272 122 1e-22 seq964 120 3e-22 seq1194 113 5e-20 seq269 102 9e-17 seq168 100 3e-16 >seq1 Length=1764766 Score = 260 bits (288), Expect = 2e-64 Identities = 264/344 (77%), Gaps = 0/344 (0%) Strand=Plus/Minus Query 153028 ACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTT 153087 ||||||| ||||| || ||||| |||||||| |||||||| || |||||||| || ||| Sbjct 983300 ACTCAAGCTGAAGAAACTTATTCAATGGTTACCGCTAACCGCTTTTGGTCCCAAATCTTT 983241 Query 153088 GGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATG 153147 || |||||||| ||||||| | ||| | |||||||||||| | |||||||| || | Sbjct 983240 GGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 983181 Query 153148 GGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 153207 ||| | |||| | || ||||| | | ||||| ||| | ||||| ||||| || || Sbjct 983180 GGTTTATGGATGAGTGCTTTTGGAGTAGTCGGTCTGGCTTTGAATCTACGTGCCTATGAC 983121 Query 153208 TTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAG 153267 || || |||||||||||| | || | |||||||||||||||||||| | ||| || || Sbjct 983120 TTCGTTTCTCAAGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTGCTACACCAAA 983061 Query 153268 AATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAG 153327 ||||| || || ||||| ||| ||||||||||| |||| || || || |||||||| Sbjct 983060 AATATTCTCTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 983001 Query 153328 AACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 ||||| | |||||||| ||||| | | || || |||||||| Sbjct 983000 AACTTTATATTCCCTGAGGAGGTTCTATCTCGTGGAAACGCTCT 982957 >seq716 Length=92840 Score = 163 bits (180), Expect = 3e-35 Identities = 201/275 (73%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 151304 ATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAAC 151363 ||||| || || || ||| | || ||||||| ||| |||| || ||||| |||||| | Sbjct 34192 ATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCACTAT 34133 Query 151364 ATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTC 151423 || || |||||||| || | |||| | ||||| |||||||| ||||| || || || ||| Sbjct 34132 ATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 34073 Query 151424 TCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAG 151483 || || || ||||| |||| || ||| || | | | ||||| ||||| || Sbjct 34072 AGTGCTATACATGGTTCCTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAAATGAA 34013 Query 151484 TCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCA 151543 || || | ||||||| ||||||||||| ||||| ||||| || || || ||||| Sbjct 34012 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCT 33953 Query 151544 CACGGTTACTTTGGTCGTCTCATCTTCCAATACGC 151578 || ||||| ||||| || | ||||||||||| || Sbjct 33952 CATGGTTATTTTGGCCGATTGATCTTCCAATATGC 33918 >seq257 Length=213233 Score = 156 bits (172), Expect = 5e-33 Identities = 247/352 (70%), Gaps = 4/352 (1%) Strand=Plus/Minus Query 152740 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 152799 ||||| || || ||||| | ||| || | |||||||||| || || || || || || Sbjct 14485 AATGCAATCGCATTCTCCGCTCCAATTGTTGTTTTTGTTTCTGTATTCCTGATTTATCCA 14426 Query 152800 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTC 152859 ||||| | ||||||| || || || ||| || || ||||| || || |||||| Sbjct 14425 TAAGGTCAGTTTGGTTGGTTCTTTGCACCCAATTTTGGTGTAGCAGCTATATTTCGATTC 14366 Query 152860 CTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTT 152919 | || || | ||||| || | || ||||||||||| | ||||| |||||||| ||| Sbjct 14365 ATCCTATTTTTCCAAGGGTTTTATAATTGGACATTGAACTCATTTCACATGATGGGAGTT 14306 Query 152920 GC--AGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATA 152977 || ||||| ||||| | || |||| | ||| ||||||| ||| |||| |||| Sbjct 14305 GCCGAGGTA--TTGGGTGCTGCTATGCTATGTGCTATTCATGACACTACCATAGAAAATA 14248 Query 152978 CTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAG 153037 | || | | |||||| ||| | ||| || ||| |||| || |||||| | Sbjct 14247 CCTTATTTGAAGATGATGATGGTGTAAATACATTCCCTACTTTTAACCCAACTCAAACTG 14188 Query 153038 AAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGG 153089 || | || ||||| |||||||| |||||| | || |||||||| || ||||| Sbjct 14187 AATAAACTTATTCAATGGTTACCGCTAACTGCTTTTGGTCCCAAATCTTTGG 14136 >seq272 Length=206342 Score = 122 bits (134), Expect = 1e-22 Identities = 340/515 (66%), Gaps = 14/515 (3%) Strand=Plus/Minus Query 152490 GTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAA---ACTTTCTTA-CTGCGG 152545 ||||||||| || || |||||||||||| |||| || | | |||||| ||| Sbjct 147162 GTATACTCATGGATTAGCAAGTTCCTATTTGGAAGGATATATGTAACTTCTTAGCTGTCA 147103 Query 152546 CAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 152605 | |||||||||| | || | | | |||||| | || | || |||| |||||| | Sbjct 147102 TAATTTCTACTCCCGTTAATAGTTTAGCACATTCTTTAATGTTACTATGGGATCCTGAAG 147043 Query 152606 CTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCC 152665 | ||| | ||||| | ||| ||| | | || || ||| ||||||| | || | Sbjct 147042 CACAATGCGATTTTACTCGTTGGTGTCAAATAAGTGGTCTGTGGACTTTTGTTGTTCTTC 146983 Query 152666 ACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATC 152724 | || |||| ||||| ||||| | | || || |||||||| || || ||| || Sbjct 146982 ATGGCATTTTCAAACTAATAGGTTTTACATTACGTCAATTTGAACTTGCTCGATCTGTTC 146923 Query 152725 GGTATCCGTCCCTACAATGCT---ATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGC 152781 | | ||| || ||| | || | ||||| | ||| || | |||||||| | Sbjct 146922 AAT-TGTATCCTTATAATATTATAATCACATTCTCCGCTCCAATTGTTGTTTTTGGTTCT 146864 Query 152782 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 152841 || || | || || || | | ||| || |||||||| | || ||| | || Sbjct 146863 GTATTCTTGATTTATCCGTTAGTTCAGTC----TGGTTTTTTACACCCAGTTTTAGCGTA 146808 Query 152842 GCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCG 152901 | ||| || || ||||| ||||| | ||||| || || || |||| ||| || || Sbjct 146807 GTAGCTATATTACGATTTACCCTCTTTTTCCAAGGGTTTCATAATTGGAAATTTAACCCA 146748 Query 152902 TTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGT 152961 ||||| |||||||| ||||| || | || | | || |||| | ||| || ||||| Sbjct 146747 TTTCACATGATGGGAGTTGCTGGGGTATT-AGTGTTGCACTGCTATGTGCTATCCATGGC 146689 Query 152962 GTTACAGTAGAGAATACTTTGTATCAAGATGGTGA 152996 | || ||||| |||||||| | | |||||||||| Sbjct 146688 GCTATCGTAGACAATACTTTATTTGAAGATGGTGA 146654 >seq964 Length=67008 Score = 120 bits (132), Expect = 3e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 153065 ACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCT 153124 |||| || |||||||| || ||||| ||| |||| ||||||||| ||| | ||||||| Sbjct 23419 ACCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTTCCAATAAACGTTGGTTACATTTCT 23478 Query 153125 TTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTG 153184 ||||| | ||| |||| || | ||| | | || | || ||||| | | ||||| | Sbjct 23479 TTATGTTATTTATACCAGTAACTGGTTTATAGATGAGTGCTCTTGGAGTAGTCGGTCTGG 23538 Query 153185 CTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTG 153244 || | ||| | ||||| || || || || |||||||||||| | | |||||||||| Sbjct 23539 CTTTGAATTTACGTGCCTATGACTTCGTTTCTCAAGAAATCCATTCAGCGGAAGATCCTG 23598 Query 153245 AATTTGAGA 153253 ||||||||| Sbjct 23599 AATTTGAGA 23607 >seq1194 Length=46772 Score = 113 bits (124), Expect = 5e-20 Identities = 218/319 (68%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 152361 TGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGACT 152420 |||| | |||||||||| | || ||||||||||||||||| | |||||| || || Sbjct 21597 TGATATTATGGATGACTGATTACGGAAGGACCGTTTCGTTTTTGTAGATTGGTCCGGTCT 21538 Query 152421 TCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGC 152480 | || ||| ||| ||| | || | || |||||| | | || | || || | Sbjct 21537 ATTGCTATTTTTTTGTGCCTATTTCACTTTAGGAGGTTGGTTCATAGGTATAACCTTTGT 21478 Query 152481 GACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTAC 152540 || || |||||||| || || |||||||||||| |||| ||||| | || Sbjct 21477 AACTTCATGCTATACTCATGGATTAGCAAGTTCCTATTTGGAATAATACAACTTCTTAAC 21418 Query 152541 TGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCC 152600 ||| | |||||| ||||| | || | | | || ||| | |||| || ||||||| Sbjct 21417 TGCCGTAGTTTCGACTCCCGTTAATAGTTTTGCACACTCTTTGTTGCTACTAGGGGGTCC 21358 Query 152601 TGAGGCTCAAGGGGA-TTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGG 152659 ||| || ||||| || ||| ||| ||| ||| | || || || ||| ||||||| | Sbjct 21357 TGAAGCACAAGGCGATTTTACTCA-TTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTG 21299 Query 152660 CGCTCCACGGGGCTTTCGC 152678 | |||||||| ||||| || Sbjct 21298 CACTCCACGGTGCTTTTGC 21280 >seq269 Length=207462 Score = 102 bits (112), Expect = 9e-17 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 152361 TGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGACT 152420 |||| | ||||||| ||| | ||| ||||||||||||||||| |||||||| || || Sbjct 67670 TGATATTATGGATGATTGGTTATGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCT 67611 Query 152421 TCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGC 152480 | || ||||| ||| ||| | ||| | || |||||| | | || || || | Sbjct 67610 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGAGGTTGGTTCGCAGGTACAGTCTTTGT 67551 Query 152481 GACGAGTTGGTATA--CTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538 || ||||||| |||| || || |||||||||||| |||| || ||||| | Sbjct 67550 AACTTCATGGTATACTCTCATGGATTAGCAAGTTCCTATTTGGAAGGATGCAACTTCTTG 67491 Query 152539 ACTGCGGCAGTTTCTACTCCAGC 152561 |||| |||||||||||||| || Sbjct 67490 CCTGCCGCAGTTTCTACTCCCGC 67468 >seq168 Length=274740 Score = 100 bits (110), Expect = 3e-16 Identities = 143/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 151627 TGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGG 151686 ||| || ||||| ||||| ||| | | ||| | |||| |||||| || ||| | || || Sbjct 245234 TGTAGTAGGTATTTGGTTTACT-CTTTAGGTATTAGCATCATGGCTTTTAACTTAAATGG 245292 Query 151687 TTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGA 151746 ||| || ||||| || | | | ||| || | || || | || |||| || | Sbjct 245293 TTTTAATTTCAATCAATTTGTAGTTGATAGTTAAGGTCGTGTAATTAATACCTAGGTTAA 245352 Query 151747 CGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 151806 | | |||||||| ||| ||||||||||||||||| || ||||||||||| ||||| Sbjct 245353 TATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 245412 Query 151807 CCCTCTCGACCTTGCTGCTG 151826 | |||| ||||| || |||| Sbjct 245413 CTCTCTAGACCTAGCGGCTG 245432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549430066511400