Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq168 114 1e-20 seq19 111 1e-19 seq1067 109 5e-19 seq6 107 2e-18 seq420 105 6e-18 seq207 104 2e-17 >seq168 Length=274740 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| |||| || || ||||| || || || || | || || ||| | | Sbjct 146385 GATGCAGATTTTTGTTAAGACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAAAGCTC 146326 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| |||||||| || || || || || || || Sbjct 146325 CGACACCATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCA 146266 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || ||||| || |||||| | | | || | || || || Sbjct 146265 GCAGAGGTTGATCTTTGCGGGCAAACAACTCGAGGATGGACGTACCCTGGCTGACTACAA 146206 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| || || || |||||||||||||| Sbjct 146205 CATCCAGAAGGAGTCAACTCTTCACTTGGTGTTGCG 146170 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || ||||| || || || || ||||| || ||| | | Sbjct 147069 GATGCAGATCTTCGTGAAAACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTC 147010 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| ||||| |||||||| || || || || || || || Sbjct 147009 TGACACCATCGATAATGTCAAAGCTAAGATTCAAGACAAGGAGGGTATCCCACCGGACCA 146950 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||| ||||| |||||||| ||||| ||| | | | || || || Sbjct 146949 GCAGAGGCTGATCTTCGCCGGCAAACAGCTTGAGGACGGCCGAACCCTCGCTGACTACAA 146890 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| || || || ||||||||| Sbjct 146889 CATCCAGAAGGAGTCCACCCTCCACTTGGTG 146859 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| |||| || || ||||| ||||| || || ||||| || || | | Sbjct 146841 GATGCAAATCTTCGTTAAGACCCTCACCGGGAAAACCATCACCCTCGAGGTTGAGAGCTC 146782 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| || | ||| ||||| ||||| || || || || || || | Sbjct 146781 CGACACCATTGACAACGTCAAGGCCAAA-ATCCAGGACAAGGAGGGCATCCCCCCAGACC 146723 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||||||||| || ||||| ||||| | ||| | | | || || | Sbjct 146722 AGCAGAGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGGCGAACCCTCGCCGACTACA 146663 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| || || || || |||||| | || | || ||||| Sbjct 146662 ACATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTTCGTGGAGG 146614 >seq19 Length=713669 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| |||||||| || || || || ||||| || || | || Sbjct 628933 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAGCTCC 628874 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| |||||||| || || || || Sbjct 628873 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGACCAG 628814 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||| || || | | | | | ||||| ||| Sbjct 628813 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGGACCCTCGCCGATTACAAC 628754 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || ||||| || || || ||| |||| | || | ||||| |||| Sbjct 628753 ATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCGTCTTCGCGGCGGCG 628705 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| || || || || ||||| || || | || Sbjct 623972 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 623913 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 623912 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATTCCTCCGGACCAG 623853 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||||| ||||| | | | | | ||||| ||| Sbjct 623852 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCGCCGATTACAAC 623793 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || |||| | || | || ||||| Sbjct 623792 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTCCGTGGAGG 623746 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| |||||||| || || || || || || || || | || Sbjct 623516 ATGCAGATATTTGTGAAAACCCTAACCGGAAAGACGATCACCCTGGAGGTGGAGAGCTCC 623457 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || ||||| || ||||| || || Sbjct 623456 GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATTCCTCCGGACCAG 623397 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||||||||||| ||| | | | || || ||| Sbjct 623396 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGAACCCTCGCCGACTACAAC 623337 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||||| | || | || ||||| Sbjct 623336 ATCCAGAAGGAGAGCACTCTTCATCTGGTGCTCCGTCTCCGTGGAGG 623290 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || | | Sbjct 623060 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGAGCTCG 623001 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 623000 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAG 622941 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||||||||| ||| |||||||| | | | | | ||||| || Sbjct 622940 CAGCGTCTGATCTTTGCCGGGAAGCAGTTGGAGGATGGTCGCACCCTTGCTGATTACAAT 622881 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 622880 ATCCAGAAGGAGTCTACCCTCCAC 622857 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||||||||| || || || || ||||| || | | Sbjct 623744 ATGCAGATCTTCGTCAAAACCCTAACCGGTAAGACGATAACCCTAGAAGTCGAGAGCTCT 623685 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || |||||||| || || || || Sbjct 623684 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCGCCGGACCAG 623625 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| ||||| || ||| ||||||| | | | | | ||||| ||| Sbjct 623624 CAGAGGCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTCGCCGATTACAAC 623565 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || || |||| Sbjct 623564 ATCCAGAAGGAGTCGACGCTGCATCTGGT 623536 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || ||||| || || || || || || || || | | Sbjct 623289 GATGCAGATTTTTGTGAAAACCCTCACCGGCAAGACGATCACCCTTGAGGTCGAGAGCTC 623230 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||| ||||| ||||| || || || || || Sbjct 623229 CGACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCA 623170 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || | | ||||| |||||||||||||| ||||| Sbjct 623169 GCAGAGGCTTATCTTCGCCGGGAAACAGCTTGAGGA 623134 >seq1067 Length=57296 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || ||||| || || || || || || || || || || | | Sbjct 37395 ATGCAGATTTTTGTCAAGACGCTTACAGGAAAGACCATCACCCTTGAGGTGGAGAGCTCA 37336 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| |||||||| || ||||| || || || || Sbjct 37335 GACACGATTGATAACGTCAAGGCAAAGATTCAAGACAAGGAGGGAATCCCCCCTGACCAG 37276 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || ||||||||||| || ||| || | | | ||||||||| Sbjct 37275 CAGCGGCTGATTTTCGCTGGGAAACAGCTCGAAGATGGTAGGACTCTTGCGGATTATAAC 37216 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||||||||| || ||| | ||| |||| || | || ||| Sbjct 37215 ATCCAGAAGGAATCGACCCTTCACCTTGTGCTGCGCCTGAGGGGTGGC 37168 >seq6 Length=1122688 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || | || || || || || Sbjct 399340 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACCATAACCTTGGAGGTCGAGTCCTCC 399281 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || |||||||| || Sbjct 399280 GACACTATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAG 399221 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| ||||| | | | | | || || ||| Sbjct 399220 CAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCCGACTACAAC 399161 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 399160 ATCCAGAAGGAGTCCACGCTTCACTTGGT 399132 >seq420 Length=153407 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | ||||| ||||| || || || || || ||||| || || || Sbjct 119324 ACCATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTCGAGGTTGAGTCC 119265 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || |||||||| ||||| || ||||| || || || Sbjct 119264 TCCGACACCATCGACAATGTGAAGACCAAGATCCAGGACAAGGAGGGAATCCCGCCGGAC 119205 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||| ||||| || ||||| ||||| | | | | | || || Sbjct 119204 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTCGCCGACTAC 119145 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || ||||| ||||| || ||| ||||| Sbjct 119144 AACATCCAGAAGGAGTCGACGCTCCACCTGGTG 119112 >seq207 Length=245090 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || || || || || || | Sbjct 172412 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGTCCTC 172471 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || || || || || || || Sbjct 172472 GGACACCATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGGATTCCGCCGGACCA 172531 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || ||||||||||| ||| | | | || || || Sbjct 172532 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAGGACGGCCGAACCCTCGCCGACTACAA 172591 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 172592 CATCCAGAAGGAGTCCACTCTCCACCTGGT 172621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449740163958600