Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq168 93.3 3e-14 >seq168 Length=274740 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||||||||||||||| || | ||||| |||||||| ||| | || || Sbjct 146613 AATGCAAATATTTGTCAAGACCCTCACCGGGAAAACCATCACCTTGGAGGTAGAAAGCTC 146554 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || | | | | || ||| ||||| ||||| || ||| | ||| || || Sbjct 146553 CGACACCATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 146494 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || ||| | || | || ||||| ||||| ||||||| | |||| | || || ||||| Sbjct 146493 GCAGAGATTGATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAA 146434 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||| |||||||| || | ||| ||||| Sbjct 146433 CATTCAGAAAGAATCCACCCTTCACTTGGTG 146403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412700742961535