Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq114 89.7 1e-12 >seq114 Length=338572 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 304986 TTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTG 305045 |||| | || || ||||| ||| |||| || | ||||| |||||||| |||||| || Sbjct 179742 TTAAGGCGAAGGAAGGTCGAATTAGAGGGAACTTGATGGGGAAACGTGTGGATTTTTCTG 179683 Query 305046 CAAGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTG 305105 || | | || ||||| |||||| | |||| || ||||||||||||| || || | Sbjct 179682 CACGTACAGTTATCACCCCTGATCCAACCATTAACATTGATGAATTAGGAGTGCC-ATGG 179624 Query 305106 A-AATTGCTTTAAAACTAACATTTCCAGAGA 305135 | ||||| ||||| || |||| |||||||| Sbjct 179623 AGTATTGCATTAAATCTTACATATCCAGAGA 179593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186387106938195