Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq716 183 9e-42 seq2 109 2e-19 seq168 89.7 2e-13 >seq716 Length=92840 Score = 183 bits (202), Expect = 9e-42 Identities = 210/280 (75%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 19966 TGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACA 20025 || ||||||| | || ||||| |||| ||||||| ||| | ||||| ||||| || || Sbjct 34196 TGGTATGCCTCTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAAGCTGAGCA 34137 Query 20026 TAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACT 20085 | || || |||||||| || | ||| | ||||| |||||||||||||| || || || Sbjct 34136 CTATATCCTTATGCACCCATTTCTTATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 34077 Query 20086 ATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAAC 20144 ||||||||| || || ||||| |||| || || | ||| | | | || || ||| Sbjct 34076 ATTCAGTGCTATACATGGTTC-CTTGGTAACCTCTAGTTTGATAAGGAAAACCACAGAAA 34018 Query 20145 AGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAG 20204 | ||| | || | ||||||| || || ||||| ||||| |||||||| || |||| Sbjct 34017 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAG 33958 Query 20205 CCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGC 20244 ||||||||||||| ||||| || |||||||||||||| || Sbjct 33957 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 33918 >seq2 Length=1456787 Score = 109 bits (120), Expect = 2e-19 Identities = 101/129 (78%), Gaps = 7/129 (5%) Strand=Plus/Plus Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241 |||||| |||||||| || ||||| ||||||||||| ||||| || ||||| |||||||| Sbjct 1455406 AGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATATTCCAATA 1455465 Query 20242 CGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 20301 ||| |||| |||||| ||||||||||| | ||||| ||||| || || || Sbjct 1455466 TGCTAGTTTC-------CTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTGGG 1455518 Query 20302 GATTTGGTT 20310 |||||||| Sbjct 1455519 TATTTGGTT 1455527 >seq168 Length=274740 Score = 89.7 bits (98), Expect = 2e-13 Identities = 137/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 20294 GTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGT 20353 || ||||| |||||||| || | || || || | ||||| ||||| | || ||| Sbjct 245235 GTAGTAGGTATTTGGTTTACT-CTTTAGGTATTAGCATCATGGCTTTTAACTTAAATGGT 245293 Query 20354 TTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGAC 20413 || || || || || | | | || | | |||||||| ||| |||| | || | | Sbjct 245294 TTTAATTTCAATCAATTTGTAGTTGATAGTTAAGGTCGTGTAATTAATACCTAGGTTAAT 245353 Query 20414 ATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTC 20473 || | || ||||||||||| || | || || ||||||||||| ||||||||||||||| Sbjct 245354 ATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 245413 Query 20474 CCACTTGACCTTGC 20487 | || ||||| || Sbjct 245414 TCTCTAGACCTAGC 245427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148779323260710