Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq168 86.0 6e-12 >seq168 Length=274740 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | ||||| ||| | ||||| | || || ||| | | Sbjct 146612 ATGCAAATATTTGTCAAGACCCTCACCGGGAAAACCATCACCTTGGAGGTAGAAAGCTCC 146553 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| || || || || ||||| || || || || ||| Sbjct 146552 GACACCATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 146493 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | || ||| || || ||||| |||| ||| || ||| ||||| Sbjct 146492 CAGAGATTGATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAAC 146433 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| |||||||||||| |||| || ||| Sbjct 146432 ATTCAGAAAGAATCCACCCTTCACTTGGTG 146403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444938644778400