Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 136 4e-27 seq420 132 5e-26 seq207 129 6e-25 seq168 129 6e-25 seq1067 109 6e-19 seq19 107 2e-18 >seq6 Length=1122688 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||||||||| || | || | ||| |||||||| ||||| || |||||||||||| | Sbjct 399113 TCCTCCTCTGAGGCGGAGAACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 399172 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| | ||| |||||||| || || || || |||| |||||||| ||||| || Sbjct 399173 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 399232 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 399233 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATAGTGTCGGAGGACTCGAC 399292 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || |||| ||||| ||||| || ||||| Sbjct 399293 CTCCAAGGTTATGGTCTTTCCCGTTAGGGTTTTCACGAAGATCTGCAT 399340 >seq420 Length=153407 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||| || || || | ||| ||||| ||||| || ||||| || |||||||||||| | Sbjct 119094 TCCTCCCCTAAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 119153 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| | ||| |||||||| ||||| || || || | |||||||| || ||||| Sbjct 119154 GAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 119213 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || || || || ||| | |||||||| || || || Sbjct 119214 GATTCCCTCCTTGTCCTGGATCTTGGTCTTCACATTGTCGATGGTGTCGGAGGACTCAAC 119273 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || |||| ||||| ||||| || ||||| Sbjct 119274 CTCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 119321 >seq207 Length=245090 Score = 129 bits (142), Expect = 6e-25 Identities = 171/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||| ||||| || | || ||||| || ||||| ||||| || |||||||||||| | Sbjct 172640 TCCTCCCCTGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 172581 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| | ||| || ||||| || || ||||| |||| ||||||||| || ||||| Sbjct 172580 GAGGGTTCGGCCGTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGCGG 172521 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || || || || ||| | ||||| || || || || Sbjct 172520 AATCCCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCGAC 172461 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTT 134720 || || || ||||| || || |||| ||||| ||||| || ||||| ||| ||| Sbjct 172460 CTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTCTTT 172405 >seq168 Length=274740 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || |||||||| | ||| || || || ||||| || ||||||||||| Sbjct 146156 TTCCACCACGAAGACGCAACACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCAG 146215 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | ||| | || ||||| |||||||| ||||| ||||| | |||||| || || | Sbjct 146216 CCAGGGTACGTCCATCCTCGAGTTGTTTGCCCGCAAAGATCAACCTCTGCTGGTCTGGTG 146275 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || |||||||| || ||||| ||| | |||||||| ||| | Sbjct 146276 GGATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCAA 146335 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || ||||| || ||||| | ||| ||||| ||||| ||||| Sbjct 146336 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTAACAAAAATCTGCAT 146384 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||| | || || ||||| ||||| || |||||||||||| Sbjct 146612 TTCCTCCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 146671 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | ||| | ||| |||||||| ||||| ||||| || | | |||||| || || | Sbjct 146672 CGAGGGTTCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGGTCTGGGG 146731 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || ||||| ||||| ||| | |||||||| || | Sbjct 146732 GGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 146791 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || |||||||| ||||| | || |||||||| |||||||| Sbjct 146792 CCTCGAGGGTGATGGTTTTCCCGGTGAGGGTCTTAACGAAGATTTGCAT 146840 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || ||||| ||||| || ||||||||||| | Sbjct 146842 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 146901 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||||||||| || || |||| | |||||| || || || Sbjct 146902 AGGGTTCGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGG 146961 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| || |||||| || | ||||| || |||||| Sbjct 146962 ATACCCTCCTTGTCTTGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACC 147021 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | |||||| ||||| || ||||| Sbjct 147022 TCGAGGGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 147068 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || |||||||| || ||||||||||||||| | Sbjct 146386 CCACCACGGAGACGGAGCACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGGCG 146445 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| || || || || ||||| | |||||| || || || Sbjct 146446 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCTGGGGGG 146505 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || |||||| ||| | |||||||| ||| || Sbjct 146506 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCTACC 146565 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || |||||||| ||||| | || || || || ||||||||| Sbjct 146566 TCCAAGGTGATGGTTTTCCCGGTGAGGGTCTTGACAAATATTTGCATT 146613 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGT-GTG 134554 || |||| ||| | ||| || || || ||||| |||||||||||||| ||| ||| || Sbjct 145939 AGACGCAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCTGCAAGGGTCCTG 145998 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||| ||||| || || ||||| | |||||| || || || || || || Sbjct 145999 CCA-TCCTCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCCTC 146057 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || |||||||| || || ||| | ||||| || || || || | ||| Sbjct 146058 CTTGTCCTGAATTTTGGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCGACTTCCAAAGT 146117 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || ||||| || || || |||||||| |||||| Sbjct 146118 GATGGTCTTTCCGGTCAAGGTCTTCACGAAAATCTGCATT 146157 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| || | ||| || | || ||||| || || || ||||| || || |||||||| | Sbjct 145701 TCCACCACGGAGGCGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCCGC 145760 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| ||| |||||||| ||||| || ||||||| | |||||| || || || Sbjct 145761 CAGGGTCCTCCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCCGGAGG 145820 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || ||||| ||| || || ||| | ||||| || || || Sbjct 145821 AATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATGGTGTCCGAGCTCTCGAC 145880 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || ||||| | || ||||||||||| ||||| Sbjct 145881 CTCCAAGGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAAATCTGCAT 145928 >seq1067 Length=57296 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| ||| ||||| || || |||||||| || ||||| || || || Sbjct 37169 CCACCCCTCAGGCGCAGCACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCCGCA 37228 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || ||||||||||| || || ||||||| |||||||| || || || Sbjct 37229 AGAGTCCTACCATCTTCGAGCTGTTTCCCAGCGAAAATCAGCCGCTGCTGGTCAGGGGGG 37288 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| ||| ||||| || | ||||| || ||||| Sbjct 37289 ATTCCCTCCTTGTCTTGAATCTTTGCCTTGACGTTATCAATCGTGTCTGAGCTCTCCACC 37348 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| || || || | || || || ||||| |||||| Sbjct 37349 TCAAGGGTGATGGTCTTTCCTGTAAGCGTCTTGACAAAAATCTGCATT 37396 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || ||||| || ||||| ||||| ||||||||||| || ||||| | | | || || Sbjct 36959 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCA-TCCTC 37017 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | ||| || |||||||||||||| | |||||| || ||||| ||||| || || || || Sbjct 37018 CAACTGCTTCCCTGCAAAAATCAACCTCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 37077 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 |||||| || || ||| | ||||| || ||||| || | || || || || Sbjct 37078 AATTTTCGCCTTCACATTGTCGACAGTGTCCGAGCTCTCCACCTCCAAGGTGATCGTCTT 37137 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || ||||| Sbjct 37138 CCCAGTCAAGGTCTTCACGAAGATCTGCAT 37167 >seq19 Length=713669 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||| || || || ||| ||||| || |||||||||||| | Sbjct 623290 CCTCCACGGAGACGGAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCG 623349 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| || || || || |||| ||||||||| || || || Sbjct 623350 AGGGTTCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 623409 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | |||||||| ||||| Sbjct 623410 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 623469 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||||| ||||| || || || ||||| Sbjct 623470 TCCAGGGTGATCGTCTTTCCGGTTAGGGTTTTCACAAATATCTGCAT 623516 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| || || || ||| ||||| || ||||||||||| Sbjct 623060 TTCCACCACGGAGACGGAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCCG 623119 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | |||| || ||| || |||||||| || || || || | | |||||| || || | Sbjct 623120 CGAGGGTGCGACCGTCCTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGGG 623179 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||| || ||| | |||||||| || | Sbjct 623180 GAATACCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCGA 623239 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || || ||||| | ||||| || ||||| ||||| Sbjct 623240 CCTCAAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCAT 623288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505221542147400