Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 109 8e-19 >seq8 Length=1027367 Score = 109 bits (120), Expect = 8e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| || ||||| | || | ||||||| ||| | || | ||||| |||| ||| || Sbjct 605789 TCCCCCTTGATCAACATAACGAGCAGTGTCATTGAAAACCCGTAGCATTGGAACAATGCC 605848 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 |||||| | ||||| ||||| ||||||||| ||| | | |||||||| || || Sbjct 605849 ATTAGACGTCCCATTGGTTCCCCGAATATAACTCCCTGTCGAACGAATATTGTGAACCGA 605908 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| || | |||||| ||||| ||||| ||||| Sbjct 605909 GACACCAATTCCTCCGGCTGATTTGCTAATAACAGCACACTCCTTCAAGGTGTCGTATAT 605968 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| ||||| | || || |||||| Sbjct 605969 CCCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 606011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686668424851800