Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq44 84.2 2e-11 >seq44 Length=533671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 || ||||||||| | || || |||| |||||||| || ||||| || ||||||||| | Sbjct 311019 GCGATATTTTGGCTCAAAAAGAGAGGATTGATGCCAGGCTTGACATTCTCAAATGAGCTT 310960 Query 44243 ATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 || | | ||||||||| | || ||||||||||||||| Sbjct 310959 ATTTCTAGAGATGAAGGCCTCCACTGCGATTTTGCTTGC 310921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397320392359975