Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq143 87.8 6e-12 >seq143 Length=298601 Score = 87.8 bits (96), Expect = 6e-12 Identities = 124/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| |||||| || |||| || || |||||||| | || || ||| ||||| Sbjct 58049 CTTCGCCGAGCGCCTCATCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGAAGCTT 58108 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 || ||||||||||| | || ||||| || | |||| || || ||||| |||| Sbjct 58109 CTGCG-CCATCTTCTGGCTAAAGAAGCGCGGGTTGATGCCGGGACTCACCTTCTCCAACG 58167 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 | ||||| || |||||||| ||||| ||||| ||||| || ||||| ||| Sbjct 58168 AGTTGATCTCGCGAGACGAGGGCTTGCACTGCGATTTCGCGTGCCTTCTGTAC 58220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587766286212775